RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 IL1RNP18510 177 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 TCN2P20062 427 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 ATP5F1P24539 256 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 ARRB2P32121 409 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 ATP1A2P50993 1020 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 MAT1AQ00266 395 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 IRF8Q02556 426 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 CASP8Q14790 479 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 ADPRMQ3LIE5 342 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 LETMD1Q6P1Q0 360 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 METTL2BQ6P1Q9 378 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 PCSK4Q6UW60 755 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 TMIGD1Q6UXZ0 262 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 AMER2Q8N7J2 671 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 TTC29Q8NA56 475 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 OR9A4Q8NGU2 314 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 UTP15Q8TED0 518 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 ZNF473Q8WTR7 871 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 SLC13A3Q8WWT9 602 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 STARD8Q92502 1023 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 RERGQ96A58 199 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 SLC45A3Q96JT2 553 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 SPSB2Q99619 263 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 IPPKQ9H8X2 491 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 GPN2Q9H9Y4 310 aaPredicted RBP10.86□□□□□ -0.67
SNX1-204ENST00000559061 IRAK4Q9NWZ3 460 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 TMCO1Q9UM00 188 aa10.86□□□□□ -0.67
SNX1-204ENST00000559061 C21orf140B9A014 251 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 COPEO14579 308 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 CLGNO14967 610 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 SMIM24O75264 130 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ETHE1O95571 254 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 HBQ1P09105 142 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 RAB40ALP0C0E4 278 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ZNF888P0CJ79 500 aaPredicted RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 EPB42P16452 691 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 IMPDH1P20839 514 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ALAS2P22557 587 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 PTPN4P29074 926 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 PIK3CGP48736 1102 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ARSFP54793 590 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 DCDP81605 110 aaKnown RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 PWP1Q13610 501 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 FAM53BQ14153 422 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 RBBP5Q15291 538 aaKnown RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 NKG7Q16617 165 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 MUM1Q2TAK8 710 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 GARNL3Q5VVW2 1013 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 SYVN1Q86TM6 617 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ZC3H7AQ8IWR0 971 aaKnown RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 ARMC2Q8NEN0 867 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 OR7G3Q8NG95 312 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 OR4F6Q8NGB9 312 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 OR5T3Q8NGG3 340 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 WDR20Q8TBZ3 569 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 TCP10LQ8TDR4 215 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 MS4A6EQ96DS6 147 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 PGM2Q96G03 612 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 QRFPRQ96P65 431 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 DPH2Q9BQC3 489 aaPredicted RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 EFCAB11Q9BUY7 163 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 MECRQ9BV79 373 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 NTMT1Q9BV86 223 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 MS4A8Q9BY19 250 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 ZNF717Q9BY31 904 aaPredicted RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 NLNQ9BYT8 704 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 SLC26A1Q9H2B4 701 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 SEMA4BQ9NPR2 832 aaPredicted RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 TNPO3Q9Y5L0 923 aaKnown RBP10.85□□□□□ -0.67
SNX1-204ENST00000559061 CACNA1GO43497 2377 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 SCN2AQ99250 2005 aa10.85□□□□□ -0.67
SNX1-204ENST00000559061 LRIT2A6NDA9 550 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 ZNF860A6NHJ4 632 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 H0YIV9 168 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 SGK494L7N484 410 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 UGDHO60701 494 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 GALR3O60755 368 aaPredicted RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 KATNA1O75449 491 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 RDH16O75452 317 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 JRKO75564 520 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CLEC3AO75596 197 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CREG1O75629 220 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 SASH3O75995 380 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 KLHL18O94889 574 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 NSA2O95478 260 aaKnown RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 KLK3P07288 261 aaPredicted RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 SERPINA6P08185 405 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 GRK3P35626 688 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TMPRSS3P57727 454 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 DNAJB13P59910 316 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CXADRP78310 365 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 OLR1P78380 273 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CLCQ05315 142 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 VAC14Q08AM6 782 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 DSG2Q14126 1118 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 FAM214AQ32MH5 1076 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms