RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 VN1R5Q7Z5H4 357 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 MILR1Q7Z6M3 343 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 LAS2Q8IYD9 372 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ARHGEF39Q8N4T4 335 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 TRPV3Q8NET8 790 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 OR7G3Q8NG95 312 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 NT5CQ8TCD5 201 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 MR1Q95460 341 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 NKD1Q969G9 470 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 LRFN5Q96NI6 719 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 GBP5Q96PP8 586 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ZNF382Q96SR6 550 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 RHBGQ9H310 441 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 LHX9Q9NQ69 397 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ZNF225Q9UK10 706 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 SCN2AQ99250 2005 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 TMEM8BA6NDV4 472 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 MEN1O00255 615 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 FFAR3O14843 346 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 GPR42O15529 346 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 MLYCDO95822 493 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 KLK3P07288 261 aaPredicted RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 CCNYL3P0C7X3 344 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 GSTM2P28161 218 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 ATP1A2P50993 1020 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 EMP3P54852 163 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 NAA20P61599 178 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 HYAL2Q12891 473 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 ZRSR2Q15696 482 aaKnown RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 NDUFA9Q16795 377 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 GGTA1PQ4G0N0 100 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 GARNL3Q5VVW2 1013 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 LCN10Q6JVE6 187 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 TMEM214Q6NUQ4 689 aaKnown RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 FAM199XQ6PEV8 388 aaPredicted RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 GPRIN3Q6ZVF9 776 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 SYVN1Q86TM6 617 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 PROSER1Q86XN7 944 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 RNF175Q8N4F7 328 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 IL22RA1Q8N6P7 574 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 PROKR1Q8TCW9 393 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 AGAP11Q8TF27 550 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 SREK1Q8WXA9 508 aaKnown RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 DCBLD2Q96PD2 775 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 PAIP2Q9BPZ3 127 aaKnown RBP16.6■□□□□ 0.25
TPM1-214ENST00000558544 SLC6A16Q9GZN6 736 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 TRPS1Q9UHF7 1281 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 STK38LQ9Y2H1 464 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 RAXQ9Y2V3 346 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 PCDHGA11Q9Y5H2 935 aa16.6■□□□□ 0.25
TPM1-214ENST00000558544 H0YIV9 168 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 UBFD1O14562 309 aaKnown RBP16.59■□□□□ 0.25
TPM1-214ENST00000558544 CLEC3AO75596 197 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 TBX6O95947 436 aaPredicted RBP16.59■□□□□ 0.25
TPM1-214ENST00000558544 SERPINA6P08185 405 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 DHRS4L1P0CG22 281 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 ITGAXP20702 1163 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 HPDP32754 393 aaPredicted RBP16.59■□□□□ 0.25
TPM1-214ENST00000558544 STAT5AP42229 794 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 SLC9A5Q14940 896 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 TOR1AIP1Q5JTV8 583 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 MANEAQ5SRI9 462 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 NUDCD3Q8IVD9 361 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
TPM1-214ENST00000558544 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.59■□□□□ 0.25
TPM1-214ENST00000558544 REPS1Q96D71 796 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 SEC16BQ96JE7 1060 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 SHCBP1LQ9BZQ2 653 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 AICDAQ9GZX7 198 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 CHST8Q9H2A9 424 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 KLHL31Q9H511 634 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 MID1IP1Q9NPA3 183 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 FAM53CQ9NYF3 392 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 PADI1Q9ULC6 663 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 MAU2Q9Y6X3 613 aa16.59■□□□□ 0.25
TPM1-214ENST00000558544 NUP210LQ5VU65 1888 aa16.58■□□□□ 0.25
TPM1-214ENST00000558544 URB1O60287 2271 aaKnown RBP16.58■□□□□ 0.25
TPM1-214ENST00000558544 LOC101059948A0A1B0GTJ6 334 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 TAF4O00268 1085 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 FOXS1O43638 330 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 SH3BGRLO75368 114 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 ZNF888P0CJ79 500 aaPredicted RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 IL1RNP18510 177 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 AGXTP21549 392 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 EIF2S3P41091 472 aaKnown RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 OR1D4P47884 311 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 PKNOX1P55347 436 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 DCDP81605 110 aaKnown RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 ABHD18Q0P651 414 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 HHATQ5VTY9 493 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 PRSS41Q7RTY9 318 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 VASH2Q86V25 355 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 CDYL2Q8N8U2 506 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 HUS1BQ8NHY5 278 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 WDR20Q8TBZ3 569 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 CT55Q8WUE5 264 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms