RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ATG10Q9H0Y0 220 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 VCXQ9H320 206 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SLC6A20Q9NP91 592 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GPR83Q9NYM4 423 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CD274Q9NZQ7 290 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 TRPC4Q9UBN4 977 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 BLOC1S6Q9UL45 172 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 RNF112Q9ULX5 631 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 MAP4K5Q9Y4K4 846 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PSMD12O00232 456 aaPredicted RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 OR1F1O43749 312 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 HEXBP07686 556 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 LTA4HP09960 611 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 MYZAPP0CAP1 466 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ACPPP15309 386 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 SERPINB1P30740 379 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 AHRP35869 848 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 SERPINB8P50452 374 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 CCL11P51671 97 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 STXBP1P61764 594 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 SLC7A5Q01650 507 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 GUCA2AQ02747 115 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 UAP1Q16222 522 aaPredicted RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 KCTD19Q17RG1 926 aaPredicted RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 PRTGQ2VWP7 1150 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 VWA5B1Q5TIE3 1220 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 PRAMEF17Q5VTA0 474 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ZNF385CQ66K41 422 aaPredicted RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 MRPL14Q6P1L8 145 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 FBXO42Q6P3S6 717 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 MRGPREQ86SM8 312 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 THOC6Q86W42 341 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 ATCAYQ86WG3 371 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ABHD11Q8NFV4 315 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ADAMTS18Q8TE60 1221 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 SLC13A3Q8WWT9 602 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ABHD17AQ96GS6 310 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 FAR2Q96K12 515 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 OR2A5Q96R48 311 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 OLFM1Q99784 485 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 TRIM4Q9C037 500 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 FAM192AQ9GZU8 254 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 LRRC4CQ9HCJ2 640 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 NUDT4Q9NZJ9 180 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 TEKT2Q9UIF3 430 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 RALYQ9UKM9 306 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 ANGPTL3Q9Y5C1 460 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 TNPO3Q9Y5L0 923 aaKnown RBP8.25□□□□□ -1.09
USP3-208ENST00000558285 SLC22A7Q9Y694 548 aa8.25□□□□□ -1.09
USP3-208ENST00000558285 NPEPPSL1A6NEC2 478 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 H3BMH7 237 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 J3QKU1 62 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 STK16O75716 305 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 WDR47O94967 919 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 NSA2O95478 260 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 TSPAN12O95859 305 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 SERPIND1P05546 499 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 CDH1P12830 882 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 NPPBP16860 134 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 TYK2P29597 1187 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 MSH2P43246 934 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 EMP2P54851 167 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 RPS18P62269 152 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 MRPS25P82663 173 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 IL10RAQ13651 578 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 SLC9A5Q14940 896 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 NKG7Q16617 165 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 PHKG1Q16816 387 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 TSNAXIP1Q2TAA8 658 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 SH2D4BQ5SQS7 431 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 FRMPD2BQ6IN97 320 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 SBSNQ6UWP8 590 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 TRMT10CQ7L0Y3 403 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 LRRC70Q7Z2Q7 622 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 CROCCP2Q86T23 111 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 LCA5Q86VQ0 697 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 EXD3Q8N9H8 876 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 SRFBP1Q8NEF9 429 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 REPS1Q96D71 796 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 MAGEB10Q96LZ2 347 aaPredicted RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 BBC3Q96PG8 261 aaPredicted RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 EFCAB11Q9BUY7 163 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 ROGDIQ9GZN7 287 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 NSRP1Q9H0G5 558 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 EHD1Q9H4M9 534 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 EPS8L2Q9H6S3 715 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 PPCSQ9HAB8 311 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 DNAJC11Q9NVH1 559 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 RIC8BQ9NVN3 520 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 P4HTMQ9NXG6 502 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 ADGRE2Q9UHX3 823 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 ZFP69BQ9UJL9 534 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 ITGB1BP2Q9UKP3 347 aa8.24□□□□□ -1.09
USP3-208ENST00000558285 RUVBL1Q9Y265 456 aaKnown RBP8.24□□□□□ -1.09
USP3-208ENST00000558285 PSAT1Q9Y617 370 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms