RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CACHD1Q5VU97 1274 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 MED27Q6P2C8 311 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ABRAXAS1Q6UWZ7 409 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 WASH2PQ6VEQ5 465 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ARMCX6Q7L4S7 300 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 RIMKLAQ8IXN7 391 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 MINDY1Q8N5J2 469 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 DPP10Q8N608 796 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ABHD11Q8NFV4 315 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 OR52E1Q8NGJ3 308 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 JPH3Q8WXH2 748 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TMEM125Q96AQ2 219 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 LRRC58Q96CX6 371 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 EGLN2Q96KS0 407 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TMEM74Q96NL1 305 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TSSK3Q96PN8 268 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 SERPINI1Q99574 410 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 HOPXQ9BPY8 73 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 HAUS8Q9BT25 410 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 EFCAB11Q9BUY7 163 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 EBPLQ9BY08 206 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TPSD1Q9BZJ3 242 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TRIM8Q9BZR9 551 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 DPY30Q9C005 99 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TCEAL2Q9H3H9 227 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 EHD1Q9H4M9 534 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 MVB12BQ9H7P6 319 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 BRF2Q9HAW0 419 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 S100A14Q9HCY8 104 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 WASH6PQ9NQA3 447 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 DMRT3Q9NQL9 472 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 IMP3Q9NV31 184 aaKnown RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 ZNF624Q9P2J8 865 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 VPS29Q9UBQ0 182 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TAC3Q9UHF0 121 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 LEF1Q9UJU2 399 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 ICKQ9UPZ9 632 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PCDHA9Q9Y5H5 950 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ANKRD12Q6UB98 2062 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 MYO10Q9HD67 2058 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 IGKV1-8A0A0C4DH67 115 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 A0A1W2PPC4 97 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 H3BNX3 289 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 DNAJA2O60884 412 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 BCAS2O75934 225 aaPredicted RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 LRATO95237 230 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 B3GALT4O96024 378 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 LMNAP02545 664 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 PRPS2P11908 318 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 TCN1P20061 433 aaPredicted RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 HTR1BP28222 390 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 RABIFP47224 123 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 CD97P48960 835 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 RAB28P51157 221 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 ATXN3P54252 364 aaPredicted RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 WNT3P56703 355 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 REEP5Q00765 189 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 FOXM1Q08050 763 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 LAPTM5Q13571 262 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SELPLGQ14242 412 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 FZD2Q14332 565 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 FAM174BQ3ZCQ3 159 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 EXOSC6Q5RKV6 272 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 C6orf10Q5SRN2 563 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 THEMIS2Q5TEJ8 643 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 C6orf163Q5TEZ5 329 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SLC30A9Q6PML9 568 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 BEND4Q6ZU67 534 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 RD3Q7Z3Z2 195 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 C17orf64Q86WR6 236 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 HID1Q8IV36 788 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SFTPA2Q8IWL1 248 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 MSRB3Q8IXL7 192 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPG11-204ENST00000557866 KIAA2013Q8IYS2 634 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 DEFB119Q8N690 84 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 C1orf52Q8N6N3 182 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 ANKRD53Q8N9V6 530 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 GLB1L3Q8NCI6 653 aaPredicted RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 HIPK4Q8NE63 616 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 OR4K1Q8NGD4 311 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 OR2L8Q8NGY9 312 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 WDR48Q8TAF3 677 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 NRG4Q8WWG1 115 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 PYDC1Q8WXC3 89 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 GTF2H4Q92759 462 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 CLDN23Q96B33 292 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SLC6A18Q96N87 628 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 PCBD2Q9H0N5 130 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 PCDHAC1Q9H158 963 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 RHBGQ9H310 441 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 OR51B5Q9H339 312 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 KIR3DX1Q9H7L2 352 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 DCLRE1BQ9H816 532 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 TBC1D17Q9HA65 648 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 PELI2Q9HAT8 420 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 SPAG4Q9NPE6 437 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 GID8Q9NWU2 228 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 TRNAU1APQ9NX07 287 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms