RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FUT10Q6P4F1 479 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 SPATA19Q7Z5L4 167 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 C5orf24Q7Z6I8 188 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 PRUNE1Q86TP1 453 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 ZFAND4Q86XD8 727 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 METTL4Q8N3J2 472 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 PRSS35Q8N3Z0 413 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 NCOA7Q8NI08 942 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 LRRC15Q8TF66 581 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 LGMNQ99538 433 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 FERMT1Q9BQL6 677 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 PARLQ9H300 379 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 RAB9BQ9NP90 201 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 MUTYHQ9UIF7 546 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 NOL7Q9UMY1 257 aaKnown RBP3.76□□□□□ -1.81
SCFD1-221ENST00000556534 PA2G4Q9UQ80 394 aaKnown RBP3.76□□□□□ -1.81
SCFD1-221ENST00000556534 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 IGHV3-20A0A0C4DH32 117 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 A8MVM7 634 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 HSPA4LO95757 839 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 ZFYP08048 801 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-221ENST00000556534 THEGLP0DJG4 465 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 IFNAR1P17181 557 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 COPB2P35606 906 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 DSCR10P59022 87 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 DHODHQ02127 395 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 PAX8Q06710 450 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 TCTEX1D4Q5JR98 221 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 FAM46CQ5VWP2 391 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 ZNF770Q6IQ21 691 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-221ENST00000556534 LCLAT1Q6UWP7 414 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 SLC22A15Q8IZD6 547 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 SETD6Q8TBK2 473 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 ATP8B4Q8TF62 1192 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 CASP10Q92851 521 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 RIT1Q92963 219 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 NXPE2Q96DL1 559 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 LURAP1Q96LR2 239 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 AK8Q96MA6 479 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 ALKBH7Q9BT30 221 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-221ENST00000556534 ALDH8A1Q9H2A2 487 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-221ENST00000556534 EXOC1Q9NV70 894 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 AGTPBP1Q9UPW5 1226 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 COLEC10Q9Y6Z7 277 aa3.75□□□□□ -1.81
SCFD1-221ENST00000556534 TDRD15B5MCY1 1934 aaKnown RBP3.75□□□□□ -1.81
SCFD1-221ENST00000556534 NEDD4P46934 1319 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 COL2A1P02458 1487 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 COL5A2P05997 1499 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 IGHV4-30-2A0A087WSY4 118 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 ARHGEF37A1IGU5 675 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 E5RGE8 158 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 TFECO14948 347 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SNAP91O60641 907 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 RPN1P04843 607 aaKnown RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 TSPY3P0CV98 308 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 TSPY8P0CW00 308 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SHC1P29353 583 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SSTR1P30872 391 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 TSPY1Q01534 308 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 ZNF177Q13360 481 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 RAPSNQ13702 412 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SLC1A5Q15758 541 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 KLHL10Q6JEL2 608 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 CAVIN1Q6NZI2 390 aaKnown RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 DCLRE1AQ6PJP8 1040 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 DHRS11Q6UWP2 260 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 C3P1Q6ZMU1 363 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SPATA21Q7Z572 469 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 OR10G7Q8NGN6 311 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 GRK7Q8WTQ7 553 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 ERO1AQ96HE7 468 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SLC45A3Q96JT2 553 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 GBP5Q96PP8 586 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 THAP10Q9P2Z0 257 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 SLC12A6Q9UHW9 1150 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 NOCTQ9UK39 431 aaKnown RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 RUVBL2Q9Y230 463 aaKnown RBP3.74□□□□□ -1.81
SCFD1-221ENST00000556534 NSG2Q9Y328 171 aa3.74□□□□□ -1.81
SCFD1-221ENST00000556534 TRAV18A0A075B6X5 111 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 TRAV34A0A0B4J273 112 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 MAGEB2O15479 319 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 SELENOFO60613 162 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 MOCS2O96007 188 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 VIMP08670 466 aaKnown RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 DLATP10515 647 aaKnown RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 C4BPBP20851 252 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 GATA2P23769 480 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 TLX1P31314 330 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 MS4A2Q01362 244 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 PSMD6Q15008 389 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 COX8CQ7Z4L0 72 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 METTL23Q86XA0 190 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 CREBRFQ8IUR6 639 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 ZC3H3Q8IXZ2 948 aaKnown RBP3.73□□□□□ -1.81
SCFD1-221ENST00000556534 TEX26Q8N6G2 289 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 C17orf47Q8NEP4 570 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 RPLP0P6Q8NHW5 317 aa3.73□□□□□ -1.81
SCFD1-221ENST00000556534 CHPT1Q8WUD6 406 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms