RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 NSDHLQ15738 373 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 SPANXN3Q5MJ09 141 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 DUPD1Q68J44 220 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 RPTNQ6XPR3 784 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 CNTN4Q8IWV2 1026 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 ZNF808Q8N4W9 903 aaPredicted RBP17.72■□□□□ 0.43
CDKN3-209ENST00000556102 AFAP1L2Q8N4X5 818 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 ABHD11Q8NFV4 315 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 SIGLEC12Q96PQ1 595 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 LPAR4Q99677 370 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 NPAS2Q99743 824 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 UTP23Q9BRU9 249 aaKnown RBP17.72■□□□□ 0.43
CDKN3-209ENST00000556102 RBCK1Q9BYM8 510 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 PABPN1LA6NDY0 278 aaKnown RBP17.71■□□□□ 0.43
CDKN3-209ENST00000556102 NDUFS4O43181 175 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 CDC123O75794 336 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-209ENST00000556102 TSPAN12O95859 305 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 AHSGP02765 367 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 CASP6P55212 293 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 AP1S2P56377 157 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 PWP1Q13610 501 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 USP10Q14694 798 aaKnown RBP17.71■□□□□ 0.43
CDKN3-209ENST00000556102 PPP1R7Q15435 360 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 ZXDCQ2QGD7 858 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-209ENST00000556102 GALNT7Q86SF2 657 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 MRGPRGQ86SM5 289 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 MCEMP1Q8IX19 187 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 SLC5A8Q8N695 610 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 OR4K1Q8NGD4 311 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 OR56A3Q8NH54 315 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 ACTRT1Q8TDG2 376 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 TSLPQ969D9 159 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 SH3BGRL2Q9UJC5 107 aa17.71■□□□□ 0.43
CDKN3-209ENST00000556102 NCOA6Q14686 2063 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-209ENST00000556102 CSMD1Q96PZ7 3565 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 TRBC2A0A5B9 178 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 OR1F1O43749 312 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 GALR3O60755 368 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 SLC19A2O60779 497 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 BANF1O75531 89 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 MLYCDO95822 493 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 FHP07954 510 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 CD46P15529 392 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 GRNP28799 593 aaKnown RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 CD96P40200 585 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 OR4D2P58180 307 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 TAS2R50P59544 299 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 IL2P60568 153 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 SKP1P63208 163 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 MEF2AQ02078 507 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 GTF3C1Q12789 2109 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 PDAP1Q13442 181 aaKnown RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 OR1C1Q15619 314 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 NIPAL1Q6NVV3 410 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 BNC2Q6ZN30 1099 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-209ENST00000556102 LGI4Q8N135 537 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 TBC1D19Q8N5T2 526 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 ZNF740Q8NDX6 193 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 OR5T3Q8NGG3 340 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 TBC1D20Q96BZ9 403 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 PYCR2Q96C36 320 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 MOCOSQ96EN8 888 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 CERS2Q96G23 380 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 SCMH1Q96GD3 660 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 SNF8Q96H20 258 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 OSBPL9Q96SU4 736 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 TRIM54Q9BYV2 358 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 KLHL1Q9NR64 748 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 ANKRD10Q9NXR5 420 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 ASIC3Q9UHC3 531 aa17.7■□□□□ 0.42
CDKN3-209ENST00000556102 ASPDHA6ND91 283 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 GABRR3A8MPY1 467 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 MAN1A2O60476 641 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 WISP2O76076 250 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 ALOX12P18054 663 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 JAK1P23458 1154 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 EEF1DP29692 281 aaKnown RBP17.69■□□□□ 0.42
CDKN3-209ENST00000556102 SLC26A5P58743 744 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 DEFB134Q4QY38 66 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 MSS51Q4VC12 460 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 STRA8Q7Z7C7 330 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 TMEM178AQ8NBL3 297 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 THAP3Q8WTV1 239 aaPredicted RBP17.69■□□□□ 0.42
CDKN3-209ENST00000556102 ATL1Q8WXF7 558 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 FBXL8Q96CD0 374 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 GPR137Q96N19 417 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 OR4K3Q96R72 315 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 HES7Q9BYE0 225 aa17.69■□□□□ 0.42
CDKN3-209ENST00000556102 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
CDKN3-209ENST00000556102 FAM227AF5H4B4 570 aa17.68■□□□□ 0.42
CDKN3-209ENST00000556102 CHST10O43529 356 aa17.68■□□□□ 0.42
CDKN3-209ENST00000556102 SERPIND1P05546 499 aa17.68■□□□□ 0.42
CDKN3-209ENST00000556102 ENO2P09104 434 aaPredicted RBP17.68■□□□□ 0.42
CDKN3-209ENST00000556102 ALDH6A1Q02252 535 aaKnown RBP17.68■□□□□ 0.42
CDKN3-209ENST00000556102 OC90Q02509 493 aaPredicted RBP17.68■□□□□ 0.42
CDKN3-209ENST00000556102 RGS1Q08116 209 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms