RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ADAD1Q96M93 576 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 NAA11Q9BSU3 229 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 MRI1Q9BV20 369 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 EBPLQ9BY08 206 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 WDR45Q9Y484 360 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 WASF2Q9Y6W5 498 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 A0A096LPI6 279 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FAM170BA6NMN3 283 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 CFIP05156 583 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 PAX7P23759 505 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 MAGEA8P43361 318 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 KCNC1P48547 511 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SLC11A1P49279 550 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 MEF2AQ02078 507 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SYPL2Q5VXT5 272 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 EGFLAMQ63HQ2 1017 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 TNFAIP8L2Q6P589 184 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 OR13C4Q8NGS5 318 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 HMGB4Q8WW32 186 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 KCNC2Q96PR1 638 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 BCL7BQ9BQE9 202 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 C14orf166Q9Y224 244 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ENTPD2Q9Y5L3 495 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 TCRBV7S2A1N4TA0A589 114 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 NIPSNAP2O75323 286 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 IGHEP01854 428 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 HOXC13P31276 330 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FASTKD3Q14CZ7 662 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 DCP2Q8IU60 420 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 OR6N1Q8NGY5 312 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 OR52J3Q8NH60 311 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 P2RY13Q9BPV8 354 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ADAM7Q9H2U9 754 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 KLRF1Q9NZS2 232 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 hCG_2039718K7EN88 272 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 LEFTY2O00292 366 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 PGAM2P15259 253 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A4P22310 534 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ARPC4P59998 168 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 RPS3AP61247 264 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 NPY5RQ15761 445 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CA9Q16790 459 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 OR52E8Q6IFG1 317 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GDF6Q6KF10 455 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 SYCE2Q6PIF2 218 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GOLGA7Q7Z5G4 137 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 SLC22A8Q8TCC7 542 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 S100A16Q96FQ6 103 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ACTR6Q9GZN1 396 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 MAGIXQ9H6Y5 334 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 METTL7AQ9H8H3 244 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 OSER1Q9NX31 292 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GHRLQ9UBU3 117 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 TAC3Q9UHF0 121 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 OARD1Q9Y530 152 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 E7ENX8 843 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 DUX1O43812 170 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 MMP2P08253 660 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 HTR1AP08908 422 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 C1GALT1C1LP0DN25 315 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 RNH1P13489 461 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 SP100P23497 879 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ARSFP54793 590 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 KIAA1614Q5VZ46 1190 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 DUS1LQ6P1R4 473 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CEACAM20Q6UY09 585 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 LDB1Q86U70 411 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ALDH16A1Q8IZ83 802 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 RHBDF1Q96CC6 855 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 M0R129 80 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CDC7O00311 574 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 LRRTM2O43300 516 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 DLX3O60479 287 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 UGDHO60701 494 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CD36P16671 472 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CTSOP43234 321 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 SEC13P55735 322 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 BTN3A2P78410 334 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 MAD2L1BPQ15013 274 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ABRAXAS2Q15018 415 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 QPCTQ16769 361 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 PTCHD3Q3KNS1 767 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 LRRC66Q68CR7 880 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 SCML4Q8N228 414 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GHDCQ8N2G8 530 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF565Q8N9K5 539 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GLYATL1Q969I3 302 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 TMEM80Q96HE8 168 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 KATNBL1Q9H079 304 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 COQ10BQ9H8M1 238 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 TBC1D17Q9HA65 648 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms