RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRIP6Q15654 476 aaKnown RBP10.28□□□□□ -0.76
TDP1-211ENST00000555178 HIST2H2ACQ16777 129 aaPredicted RBP10.28□□□□□ -0.76
TDP1-211ENST00000555178 HIST2H2AA3Q6FI13 130 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 WDR74Q6RFH5 385 aaPredicted RBP10.28□□□□□ -0.76
TDP1-211ENST00000555178 DHRS13Q6UX07 377 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 RNF165Q6ZSG1 346 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 SLITRK4Q8IW52 837 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 AMER3Q8N944 861 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 CLHC1Q8NHS4 586 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 NAT6Q93015 286 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 TEX37Q96LM6 180 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 CCDC74BQ96LY2 380 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 OR2A5Q96R48 311 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 RAB33BQ9H082 229 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 LRTM1Q9HBL6 345 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 TMEM184CQ9NVA4 438 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 ARL8BQ9NVJ2 186 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 RIC8BQ9NVN3 520 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 FREM2Q5SZK8 3169 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 TRBC2A0A5B9 178 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 CAPN14A8MX76 684 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 RTCAO00442 366 aaKnown RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 DNAJB6O75190 326 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 TACR1P25103 407 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 TBL3Q12788 808 aaKnown RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 CSTF3Q12996 717 aaKnown RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 PTGR1Q14914 329 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 C16orf72Q14CZ0 275 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 GPR19Q15760 415 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 HKDC1Q2TB90 917 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 TMEM71Q6P5X7 295 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 PAOXQ6QHF9 649 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 C19orf47Q8N9M1 422 aaKnown RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 KCT2Q8NC54 265 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 WDR48Q8TAF3 677 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 CREB3L4Q8TEY5 395 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 PMEPA1Q969W9 287 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 MAGEB10Q96LZ2 347 aaPredicted RBP10.27□□□□□ -0.76
TDP1-211ENST00000555178 F2RL3Q96RI0 385 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 C1GALT1Q9NS00 363 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 C1orf109Q9NX04 203 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 VPS29Q9UBQ0 182 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 BAIAP2L1Q9UHR4 511 aa10.27□□□□□ -0.76
TDP1-211ENST00000555178 TLCD2A6NGC4 264 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 ANKDD1BA6NHY2 528 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 D6RAR5 112 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 H0YGG7 62 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 NDUFS4O43181 175 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 RSL1D1O76021 490 aaKnown RBP10.27□□□□□ -0.77
TDP1-211ENST00000555178 G6PDP11413 515 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 CPA2P48052 419 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 ARF3P61204 181 aaPredicted RBP10.27□□□□□ -0.77
TDP1-211ENST00000555178 ERVK-8P63133 956 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 SQSTM1Q13501 440 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 IL23RQ5VWK5 629 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 OGFOD2Q6N063 350 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 ARHGAP22Q7Z5H3 698 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 ZFAND4Q86XD8 727 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 DNAJC22Q8N4W6 341 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 C1orf52Q8N6N3 182 aaKnown RBP10.27□□□□□ -0.77
TDP1-211ENST00000555178 OR6C4Q8NGE1 309 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 STON2Q8WXE9 905 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 REPS1Q96D71 796 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 GFM1Q96RP9 751 aaKnown RBP10.27□□□□□ -0.77
TDP1-211ENST00000555178 CCT7Q99832 543 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 MS4A8Q9BY19 250 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 RHBGQ9H310 441 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 AIG1Q9NVV5 245 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 OCIAD1Q9NX40 245 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 SNX7Q9UNH6 387 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 TRIM33Q9UPN9 1127 aa10.27□□□□□ -0.77
TDP1-211ENST00000555178 ARHGAP10A1A4S6 786 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 CCDC22O60826 627 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 VPS4BO75351 444 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 KLHL18O94889 574 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 T-ENOLP0DO92 83 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 THRAP10827 490 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 CXCR2P25025 360 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 GRK3P35626 688 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 DUSP3P51452 185 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 VSX2P58304 361 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 RAE1P78406 368 aaKnown RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 KLF10Q13118 480 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 METTL21CQ5VZV1 264 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 KLHL35Q6PF15 583 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 GK5Q6ZS86 529 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 ZNF771Q7L3S4 317 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 PRSS41Q7RTY9 318 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 UBE3DQ7Z6J8 389 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PLXDC1Q8IUK5 500 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 LIX1Q8N485 282 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 CHCHD4Q8N4Q1 142 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 GBP7Q8N8V2 638 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 CMTM7Q96FZ5 175 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms