RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 KRT6BP04259 564 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 NTRK1P04629 796 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SERPINA6P08185 405 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 FGF4P08620 206 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 UROSP10746 265 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ZNF28P17035 718 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 HMOX2P30519 316 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 GCGRP47871 477 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 KRT6CP48668 564 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 EMP3P54852 163 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 HYAL2Q12891 473 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 COL9A2Q14055 689 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SH2D4BQ5SQS7 431 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 YOD1Q5VVQ6 348 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 KANK2Q63ZY3 851 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 CLEC6AQ6EIG7 209 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 TMEM214Q6NUQ4 689 aaKnown RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 CLYBLQ8N0X4 340 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 RNF175Q8N4F7 328 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ARHGEF39Q8N4T4 335 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 KCT2Q8NC54 265 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 FAM76AQ8TAV0 307 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 AGR3Q8TD06 166 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 LRRC8CQ8TDW0 803 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 CKAP2Q8WWK9 683 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SELENOMQ8WWX9 145 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 NXPE2Q96DL1 559 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 MTFMTQ96DP5 389 aaKnown RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 RNF31Q96EP0 1072 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 C10orf90Q96M02 699 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 MAGEB18Q96M61 343 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SORT1Q99523 831 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 MTERF1Q99551 399 aaKnown RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 NDC1Q9BTX1 674 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 MS4A8Q9BY19 250 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ULBP3Q9BZM4 244 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SLC7A5P2Q9GIP4 190 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SLC6A16Q9GZN6 736 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 FARSBQ9NSD9 589 aaKnown RBP11.66□□□□□ -0.54
SHMT2-209ENST00000553949 THAP1Q9NVV9 213 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ZDHHC2Q9UIJ5 367 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 SRPK3Q9UPE1 567 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 RAP2CQ9Y3L5 183 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 TRAF6Q9Y4K3 522 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 PCDHGA7Q9Y5G6 932 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 PTPRBP23467 1997 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
SHMT2-209ENST00000553949 WDFY3Q8IZQ1 3526 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 MAGEB17A8MXT2 336 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 TMEM233B4DJY2 109 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 BRINP1O60477 761 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 CPNE3O75131 537 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 ULK1O75385 1050 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 STK17BO94768 372 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 KIAA0754O94854 1291 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 MED26O95402 600 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 TGFB1P01137 390 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 PDYNP01213 254 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 HBQ1P09105 142 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 SERPINB3P29508 390 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 SLC5A2P31639 672 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 HTR6P50406 440 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 ARSFP54793 590 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 STXBP1P61764 594 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 RPS13P62277 151 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 SHC2P98077 582 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 ABRAXAS2Q15018 415 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 NDUFA9Q16795 377 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 MUM1Q2TAK8 710 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 FAM214AQ32MH5 1076 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 TOR1AIP1Q5JTV8 583 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 GARNL3Q5VVW2 1013 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 RHBDD2Q6NTF9 364 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 ZNF781Q8N8C0 355 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 SLC38A9Q8NBW4 561 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 HBEGFQ99075 208 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 AICDAQ9GZX7 198 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 OR51B5Q9H339 312 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 ASCL3Q9NQ33 180 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 CUTCQ9NTM9 273 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 PSD3Q9NYI0 1048 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 HAO1Q9UJM8 370 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 MRPS2Q9Y399 296 aaKnown RBP11.65□□□□□ -0.54
SHMT2-209ENST00000553949 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 KNTC1P50748 2209 aa11.65□□□□□ -0.54
SHMT2-209ENST00000553949 SPTBN2O15020 2390 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 URADA6NGE7 173 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SH3BGRLO75368 114 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ETHE1O95571 254 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 CHEK2O96017 543 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms