RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ADAM8P78325 824 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 PRDX1Q06830 199 aaKnown RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 CUL1Q13616 776 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ZNF766Q5HY98 468 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 SPANXN3Q5MJ09 141 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 HP1BP3Q5SSJ5 553 aaPredicted RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 CES4AQ5XG92 561 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ZNF425Q6IV72 752 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 CNTN4Q8IWV2 1026 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 AMER3Q8N944 861 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 FBXO15Q8NCQ5 510 aaPredicted RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 CD200R1Q8TD46 325 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ASB11Q8WXH4 323 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ARSGQ96EG1 525 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 CABS1Q96KC9 395 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 OR2A5Q96R48 311 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 KRT12Q99456 494 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 GPR21Q99679 349 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 SMR3AQ99954 134 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 FAM167BQ9BTA0 163 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 NAT9Q9BTE0 207 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 MRPS30Q9NP92 439 aaKnown RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 MKKSQ9NPJ1 570 aaPredicted RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 RIC8BQ9NVN3 520 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 UTP6Q9NYH9 597 aaKnown RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 COQ3Q9NZJ6 369 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 COMMD10Q9Y6G5 202 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 TEX264Q9Y6I9 313 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 NBEAL1Q6ZS30 2694 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ASPDHA6ND91 283 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ZNF839A8K0R7 811 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 FAM227AF5H4B4 570 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 SMAPO00193 183 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 WFS1O76024 890 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 CCNDBP1O95273 360 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 MLYCDO95822 493 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 CYC1P08574 325 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 HOXD4P09016 255 aaPredicted RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 MPC1LP0DKB6 136 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ITGAMP11215 1152 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ICAM2P13598 275 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 EZRP15311 586 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 RPA3P35244 121 aaPredicted RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 RPL21P46778 160 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 ABATP80404 500 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 MRPS25P82663 173 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 CBLBQ13191 982 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 FAM53BQ14153 422 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 TEDDM1Q5T9Z0 273 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 TRMT10BQ6PF06 316 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 TMEM205Q6UW68 189 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 C3P1Q6ZMU1 363 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 CXXC5Q7LFL8 322 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 SIAH3Q8IW03 269 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 PRSS58Q8IYP2 241 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 PDIK1LQ8N165 341 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 CSNK1A1LQ8N752 337 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 SNF8Q96H20 258 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ALPK1Q96QP1 1244 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 PKP4Q99569 1192 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ACAT2Q9BWD1 397 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 TRIM31Q9BZY9 425 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 ZNF700Q9H0M5 742 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 TSPAN10Q9H1Z9 355 aaPredicted RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 CCDC68Q9H2F9 335 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 LIME1Q9H400 295 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 SYNPO2LQ9H987 977 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 SLC17A6Q9P2U8 582 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 TRPC4Q9UBN4 977 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 PPT2Q9UMR5 302 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 RUVBL1Q9Y265 456 aaKnown RBP11.5□□□□□ -0.57
DDX54-206ENST00000549271 ATRQ13535 2644 aa11.5□□□□□ -0.57
DDX54-206ENST00000549271 NPIPA5E9PKD4 350 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ZNHIT1O43257 154 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 FOXS1O43638 330 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ASNA1O43681 348 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 TOXO94900 526 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 CATP04040 527 aaKnown RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 ABOP16442 354 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 PNLIPRP1P54315 467 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 CDKN2DP55273 166 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ETF1P62495 437 aaKnown RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 ALDH6A1Q02252 535 aaKnown RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 HKDC1Q2TB90 917 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 TTLL9Q3SXZ7 439 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 RBM20Q5T481 1227 aaKnown RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 ABHD17BQ5VST6 288 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 ICE2Q659A1 982 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 TMEM198Q66K66 360 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 SUSD1Q6UWL2 747 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
DDX54-206ENST00000549271 CPNE9Q8IYJ1 553 aa11.49□□□□□ -0.57
DDX54-206ENST00000549271 EID3Q8N140 333 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms