RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ISCA2Q86U28 154 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX54-205ENST00000548786 AMER2Q8N7J2 671 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 OR11G2Q8NGC1 345 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 OR5T3Q8NGG3 340 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 SLC44A1Q8WWI5 657 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 CCT6BQ92526 530 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 EPN3Q9H201 632 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 CNOT10Q9H9A5 744 aaKnown RBP14.95□□□□□ -0.02
DDX54-205ENST00000548786 NMRAL1Q9HBL8 299 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 ZNF160Q9HCG1 818 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 MKKSQ9NPJ1 570 aaPredicted RBP14.95□□□□□ -0.02
DDX54-205ENST00000548786 MKL2Q9ULH7 1088 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 PCDHGA9Q9Y5G4 932 aaKnown RBP14.95□□□□□ -0.02
DDX54-205ENST00000548786 IKBKGQ9Y6K9 419 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 NUP210LQ5VU65 1888 aa14.95□□□□□ -0.02
DDX54-205ENST00000548786 IGLV3-12A0A075B6K2 115 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 A0A087X1B8 175 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 MAP2K7O14733 419 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 KERAO60938 352 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 STK16O75716 305 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 CDC123O75794 336 aaPredicted RBP14.94□□□□□ -0.02
DDX54-205ENST00000548786 CEACAM4O75871 244 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
DDX54-205ENST00000548786 ALDOAP04075 364 aaKnown RBP14.94□□□□□ -0.02
DDX54-205ENST00000548786 C1GALT1C1LP0DN25 315 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 MSH2P43246 934 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 XCR1P46094 333 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 EFNA3P52797 238 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 RAB8AP61006 207 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 TLE1Q04724 770 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 KLRB1Q12918 225 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 PDK4Q16654 411 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 TOR1AIP1Q5JTV8 583 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 TEX35Q5T0J7 233 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 SLCO4C1Q6ZQN7 724 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 TCAIMQ8N3R3 496 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 PDPRQ8NCN5 879 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 OR51Q1Q8NH59 317 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 STAG3L4Q8TBR4 150 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 KLHL31Q9H511 634 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 ATP13A2Q9NQ11 1180 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 C14orf105Q9NVL8 296 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 NUDT4Q9NZJ9 180 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 ZFP69BQ9UJL9 534 aa14.94□□□□□ -0.02
DDX54-205ENST00000548786 A0A087WUV0 522 aaPredicted RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 A0A0G2JN53 185 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 H0YIG0 161 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 DNAJB6O75190 326 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 H2AFYO75367 372 aaKnown RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 ZIC2O95409 532 aaPredicted RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 IGHEP01854 428 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 FAM83EQ2M2I3 478 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 XKR6Q5GH73 641 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 ATG9BQ674R7 924 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 KLHDC8AQ8IYD2 350 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 NT5CQ8TCD5 201 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 PEX11GQ96HA9 241 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 ATOH8Q96SQ7 321 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 ZNF358Q9NW07 568 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 CPSF2Q9P2I0 782 aaKnown RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 PTBP2Q9UKA9 531 aaKnown RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 ZNF451Q9Y4E5 1061 aa14.93□□□□□ -0.02
DDX54-205ENST00000548786 SPENQ96T58 3664 aaKnown RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 PRRC2CQ9Y520 2896 aaKnown RBP14.93□□□□□ -0.02
DDX54-205ENST00000548786 IGHV3-20A0A0C4DH32 117 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 EXOC1LA0A1B0GW35 172 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 LRRC14BA6NHZ5 514 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 C4orf51C9J302 202 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 PRAMEF4O60810 478 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 IPO13O94829 963 aaKnown RBP14.92□□□□□ -0.02
DDX54-205ENST00000548786 BMP10O95393 424 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 GFAPP14136 432 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 ALOX12P18054 663 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 CXCR2P25025 360 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 AHRP35869 848 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 GGT5P36269 586 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 CASRP41180 1078 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 MLLT10P55197 1068 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 Q0VFX4 171 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 AIMP2Q13155 320 aaKnown RBP14.92□□□□□ -0.02
DDX54-205ENST00000548786 PWP1Q13610 501 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 DOC2AQ14183 400 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 MYBPC3Q14896 1274 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 HERC3Q15034 1050 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 PRAMEF9Q5VWM5 478 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 TMIGD1Q6UXZ0 262 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 LANCL3Q6ZV70 420 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 ABHD13Q7L211 337 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 TAOK1Q7L7X3 1001 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 PLD6Q8N2A8 252 aaKnown RBP14.92□□□□□ -0.02
DDX54-205ENST00000548786 DCAKDQ8WVC6 231 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 SARGQ9BW04 601 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 FUT8Q9BYC5 575 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 CD244Q9BZW8 370 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 TGIF2Q9GZN2 237 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 VN1R1Q9GZP7 353 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 RHBGQ9H310 441 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 ZBTB20Q9HC78 741 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms