RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CDKN1AP38936 164 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 MNDAP41218 407 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 NPBWR1P48145 328 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 B3GALT5-AS1P59052 145 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 EEF1A1P68104 462 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 EEF1A2Q05639 463 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 MBTD1Q05BQ5 628 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ZBTB17Q13105 803 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 NONOQ15233 471 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 HLFQ16534 295 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CYP4A22Q5TCH4 519 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 EEF1A1P5Q5VTE0 462 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF530Q6P9A1 599 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CORO6Q6QEF8 472 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CATSPER4Q7RTX7 472 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 SLC9B2Q86UD5 537 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 MEX3DQ86XN8 651 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 GPALPP1Q8IXQ4 340 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CLEC1AQ8NC01 280 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 KIAA0895Q8NCT3 520 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 OR4K1Q8NGD4 311 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 OR10Q1Q8NGQ4 319 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 PSMA8Q8TAA3 256 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 GRHL3Q8TE85 626 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 UBLCP1Q8WVY7 318 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 WBP2Q969T9 261 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 PYCR2Q96C36 320 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 DCPSQ96C86 337 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 AP2M1Q96CW1 435 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 C17orf77Q96MU5 243 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 GDAP1L1Q96MZ0 367 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF385AQ96PM9 386 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CCDC3Q9BQI4 270 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF559Q9BR84 538 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 SEZ6LQ9BYH1 1024 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 NYXQ9GZU5 481 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 AKIRIN1Q9H9L7 192 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 COMMD8Q9NX08 183 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 WWOXQ9NZC7 414 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 NINJ2Q9NZG7 142 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 VDAC3Q9Y277 283 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 RPH3AQ9Y2J0 694 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ADAMTSL1Q8N6G6 1762 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 A0A0C4DFX4 3053 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 KDRP35968 1356 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 THSD7BQ9C0I4 1608 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 SYCE3A1L190 88 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 CCDC69A6NI79 296 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRR23D1E9PI22 279 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 F8VVB4 439 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 F8VWA3 439 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRPSAP2O60256 369 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 SNX3O60493 162 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 CRCPO75575 148 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 DDHD2O94830 711 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 BAG4O95429 457 aaKnown RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRSS2P07478 247 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 STAG3L1P0CL83 205 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRR23D2P0DMB1 279 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 DLATP10515 647 aaKnown RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF23P17027 643 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 DGKAP23743 735 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 MAPK3P27361 379 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PIK3R1P27986 724 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 EPS15P42566 896 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 IER3P46695 156 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 VAMP7P51809 220 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 LUMP51884 338 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 FUT6P51993 359 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PDX1P52945 283 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 MLLT10P55197 1068 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 RPS18P62269 152 aaKnown RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 FKBP1BP68106 108 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 TUBA1BP68363 451 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 TRAF2Q12933 501 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 TRA2AQ13595 282 aaKnown RBP eCLIP3.77□□□□□ -1.812e-56■■■■□ 20.9
SNHG1-222ENST00000545308 SF3B4Q15427 424 aaKnown RBP eCLIP3.77□□□□□ -1.817e-52■■■■■ 54.2
SNHG1-222ENST00000545308 IFI44LQ53G44 452 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 ETFRF1Q6IPR1 90 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF770Q6IQ21 691 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRR5LQ6MZQ0 368 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 C1orf186Q6ZWK4 172 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PHLDB2Q86SQ0 1253 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 ANKRD46Q86W74 232 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 AMIGO1Q86WK6 493 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 NBPF5PQ86XG9 351 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 ERC1Q8IUD2 1116 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 KLHDC8AQ8IYD2 350 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 RYBPQ8N488 228 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 NEK11Q8NG66 645 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 SAP25Q8TEE9 199 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 MARK4Q96L34 752 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 FSD1Q9BTV5 496 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 TLE6Q9H808 572 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 PRMT8Q9NR22 394 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-222ENST00000545308 OLFML3Q9NRN5 406 aa3.77□□□□□ -1.81
SNHG1-222ENST00000545308 MRPL17Q9NRX2 175 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms