RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TGFBIQ15582 683 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZKSCAN8Q15776 578 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IGFBP7Q16270 282 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NADK2Q4G0N4 442 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IRAK1BP1Q5VVH5 260 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SULT1C3Q6IMI6 304 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IGFL3Q6UXB1 125 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NDUFAF7Q7L592 441 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KLHDC8AQ8IYD2 350 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TCAIMQ8N3R3 496 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SPATA6LQ8N4H0 392 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KCT2Q8NC54 265 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZNF740Q8NDX6 193 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OR51Q1Q8NH59 317 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IFT81Q8WYA0 676 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 UBXN10Q96LJ8 280 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TSNARE1Q96NA8 513 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 AIF1LQ9BQI0 150 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RHOXF2Q9BQY4 288 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 UNKQ9C0B0 810 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CLMPQ9H6B4 373 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ANKZF1Q9H8Y5 726 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CNOT10Q9H9A5 744 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NMRAL1Q9HBL8 299 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SGK494L7N484 410 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MAP2K7O14733 419 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TAPBPO15533 448 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WDR47O94967 919 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HPP00738 406 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SERPIND1P05546 499 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TUBBP07437 444 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 C1GALT1C1LP0DN25 315 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ACPPP15309 386 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IL1RNP18510 177 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GNAZP19086 355 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IL10P22301 178 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PHBP35232 272 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GDF5P43026 501 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SCTRP47872 440 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLC6A12P48065 614 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KCNC1P48547 511 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MLLT10P55197 1068 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MAT1AQ00266 395 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RGS1Q08116 209 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HERC3Q15034 1050 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RBBP5Q15291 538 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SYT16Q17RD7 645 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 C18orf21Q32NC0 220 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PLEKHN1Q494U1 663 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 AGAP7PQ5VUJ5 663 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NIPAL1Q6NVV3 410 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 JMJD6Q6NYC1 403 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TMEM205Q6UW68 189 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RAPH1Q70E73 1250 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RELL1Q8IUW5 271 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZC3H7AQ8IWR0 971 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZADH2Q8N4Q0 377 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 AFAP1L2Q8N4X5 818 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TRPV3Q8NET8 790 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 STAG3L4Q8TBR4 150 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NT5CQ8TCD5 201 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 METTL21AQ8WXB1 218 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TM9SF4Q92544 642 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KIAA1191Q96A73 305 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PNPLA2Q96AD5 504 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 C8orf44Q96CB5 159 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MOCOSQ96EN8 888 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 THOC3Q96J01 351 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 AGAP4Q96P64 663 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CYTH2Q99418 400 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LHPPQ9H008 270 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLAMF7Q9NQ25 335 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZFP69BQ9UJL9 534 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MKL2Q9ULH7 1088 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ACOT9Q9Y305 439 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NAALAD2Q9Y3Q0 740 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CPAMD8Q8IZJ3 1885 aa9.21□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LOC102723996A0A087X1L8 192 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NSG1A0A0A6YYJ2 146 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 A0A1W2PQ72 361 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 URADA6NGE7 173 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CLGNO14967 610 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NDUFS4O43181 175 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ALOX12BO75342 701 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 STK16O75716 305 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KLHL18O94889 574 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZIC2O95409 532 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 S100BP04271 92 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CYC1P08574 325 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 COX6A1P12074 109 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ICAM2P13598 275 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ALOX12P18054 663 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 VARSP26640 1264 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 XCR1P46094 333 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SNRPNP63162 240 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms