RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 STXBP1P61764 594 aaKnown RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 CSTF3Q12996 717 aaKnown RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 ABRAXAS2Q15018 415 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 TCHHL1Q5QJ38 904 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 ADNP2Q6IQ32 1131 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 VN1R5Q7Z5H4 357 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 TTC29Q8NA56 475 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 TWIST2Q8WVJ9 160 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 CENPKQ9BS16 269 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 SYNPO2LQ9H987 977 aa22.04■■□□□ 1.12
HOMER3-205ENST00000542541 FARSBQ9NSD9 589 aaKnown RBP22.04■■□□□ 1.12
HOMER3-205ENST00000542541 FGF5P12034 268 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 ID4P47928 161 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 FAM214AQ32MH5 1076 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 WDR75Q8IWA0 830 aaKnown RBP22.03■■□□□ 1.12
HOMER3-205ENST00000542541 SERPINI1Q99574 410 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 ZPBPQ9BS86 351 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 ASPSCR1Q9BZE9 553 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 SPRTNQ9H040 489 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-205ENST00000542541 KNTC1P50748 2209 aa22.03■■□□□ 1.12
HOMER3-205ENST00000542541 FITM1A5D6W6 292 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 FAM149AA5PLN7 773 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 LRIT2A6NDA9 550 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 EDF1O60869 148 aaKnown RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 TGFB1P01137 390 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 HTR6P50406 440 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 RPS13P62277 151 aaKnown RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 TGM3Q08188 693 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 CUL3Q13618 768 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 NDUFA9Q16795 377 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 PRTGQ2VWP7 1150 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 TMEM35AQ53FP2 167 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 DCAF12Q5T6F0 453 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 YOD1Q5VVQ6 348 aaPredicted RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 GARNL3Q5VVW2 1013 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 CEACAM20Q6UY09 585 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 TRIM46Q7Z4K8 759 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 DDIASQ8IXT1 998 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 SRFBP1Q8NEF9 429 aaKnown RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 TAAR9Q96RI9 348 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 MS4A8Q9BY19 250 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 SLC6A16Q9GZN6 736 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 STARD5Q9NSY2 213 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 MARCOQ9UEW3 520 aaPredicted RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 PISDQ9UG56 409 aa22.02■■□□□ 1.12
HOMER3-205ENST00000542541 RUVBL1Q9Y265 456 aaKnown RBP22.02■■□□□ 1.12
HOMER3-205ENST00000542541 HYKKA2RU49 373 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 SLC28A1O00337 649 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 HDAC3O15379 428 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 P2RX6O15547 441 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 KITP10721 976 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 ARSFP54793 590 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 HKDC1Q2TB90 917 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.02■■□□□ 1.11
HOMER3-205ENST00000542541 C3orf38Q5JPI3 329 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 DEPDC1Q5TB30 811 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 TMEM164Q5U3C3 297 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 KHDRBS2Q5VWX1 349 aaKnown RBP22.02■■□□□ 1.11
HOMER3-205ENST00000542541 TEFMQ96QE5 360 aaKnown RBP22.02■■□□□ 1.11
HOMER3-205ENST00000542541 MACROD1Q9BQ69 325 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 NDC1Q9BTX1 674 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 REXO4Q9GZR2 422 aaKnown RBP22.02■■□□□ 1.11
HOMER3-205ENST00000542541 SATB2Q9UPW6 733 aa22.02■■□□□ 1.11
HOMER3-205ENST00000542541 TRPC5OSA6NMA1 111 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 H3BMH7 237 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 RGS14O43566 566 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 STATHP02808 62 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 ITIH1P19827 911 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 MAPK10P53779 464 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 IMPG1Q17R60 797 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 ADPRMQ3LIE5 342 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 FOXR1Q6PIV2 292 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 SCIMPQ6UWF3 145 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 ABHD13Q7L211 337 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 TMEM126BQ8IUX1 230 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 KCT2Q8NC54 265 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 HBEGFQ99075 208 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 DDA1Q9BW61 102 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 AHSPQ9NZD4 102 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 VPS29Q9UBQ0 182 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 SLC12A4Q9UP95 1085 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 SRPK3Q9UPE1 567 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 PCDHGA8Q9Y5G5 932 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 SLC22A7Q9Y694 548 aa22.01■■□□□ 1.11
HOMER3-205ENST00000542541 PIP5K1BO14986 540 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 SKAP2O75563 359 aaPredicted RBP22■■□□□ 1.11
HOMER3-205ENST00000542541 CTSBP07858 339 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 HBQ1P09105 142 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 LINC00032P0C843 101 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 GNGT1P63211 74 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 HYAL2Q12891 473 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 PDCD2Q16342 344 aaPredicted RBP22■■□□□ 1.11
HOMER3-205ENST00000542541 MUM1Q2TAK8 710 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 TOR1AIP1Q5JTV8 583 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 TMEM214Q6NUQ4 689 aaKnown RBP22■■□□□ 1.11
HOMER3-205ENST00000542541 RNF175Q8N4F7 328 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 CHMP6Q96FZ7 201 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 F2RL3Q96RI0 385 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 SLC7A5P2Q9GIP4 190 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 OR51B5Q9H339 312 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms