RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PIAS1O75925 651 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 TSPAN12O95859 305 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 ONECUT2O95948 504 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 HPP00738 406 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 ALBP02768 609 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 ERGP11308 486 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 CMPK1P30085 196 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 TAS2R39P59534 338 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 ART3Q13508 389 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 FASTKQ14296 549 aaKnown RBP14.16□□□□□ -0.14
USB1-203ENST00000539737 CYHR1Q6ZMK1 362 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 NACC2Q96BF6 587 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 MIEF2Q96C03 454 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 FUT8Q9BYC5 575 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 ACSS3Q9H6R3 686 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 GPAMQ9HCL2 828 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 SEMA3GQ9NS98 782 aa14.16□□□□□ -0.14
USB1-203ENST00000539737 NCOA6Q14686 2063 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 NSG1A0A0A6YYJ2 146 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 OR2W5A6NFC9 320 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 CCNDBP1O95273 360 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 ACSL3O95573 720 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 SYF2O95926 243 aaKnown RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 UQCRHP07919 91 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 ENO2P09104 434 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 STMN1P16949 149 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 RPA3P35244 121 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 KIR3DL1P43629 444 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 MAT1AQ00266 395 aaKnown RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 TSTA3Q13630 321 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 USP10Q14694 798 aaKnown RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 EFTUD2Q15029 972 aaKnown RBP eCLIP14.15□□□□□ -0.14
USB1-203ENST00000539737 ZNF630Q2M218 657 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 ATG9BQ674R7 924 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 TMEM207Q6UWW9 146 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 BNC2Q6ZN30 1099 aaPredicted RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 KBTBD2Q8IY47 623 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 MCOLN3Q8TDD5 553 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 PDLIM5Q96HC4 596 aaKnown RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 ZNF285Q96NJ3 590 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 LMF1Q96S06 567 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 PKP4Q99569 1192 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 ACAT2Q9BWD1 397 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 PARVBQ9HBI1 364 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 ZNF304Q9HCX3 659 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 SEC14L3Q9UDX4 400 aa14.15□□□□□ -0.14
USB1-203ENST00000539737 NXT1Q9UKK6 140 aaKnown RBP14.15□□□□□ -0.14
USB1-203ENST00000539737 DYTNA2CJ06 578 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 PRICKLE3O43900 615 aaPredicted RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 MAN1A2O60476 641 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 SLC16A8O95907 504 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 ABHD2P08910 425 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 HIST1H2AGP0C0S8 130 aaPredicted RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 HIST1H2ADP20671 130 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 FBLP22087 321 aaKnown RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 CA7P43166 264 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 PNLIPRP1P54315 467 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 AP1S2P56377 157 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 ZKSCAN8Q15776 578 aaPredicted RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 RPUSD3Q6P087 351 aaKnown RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 C3P1Q6ZMU1 363 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 TRMT10CQ7L0Y3 403 aaKnown RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 TAOK1Q7L7X3 1001 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.14□□□□□ -0.153e-11■■■■■ 52.2
USB1-203ENST00000539737 ANKRD7Q92527 254 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 HIST1H2AHQ96KK5 128 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 HIST1H2AJQ99878 128 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 H2AFJQ9BTM1 129 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 TRIM54Q9BYV2 358 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 ANKRD10Q9NXR5 420 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 SUCOQ9UBS9 1254 aaKnown RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 ADAMTS6Q9UKP5 1117 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 MTO1Q9Y2Z2 717 aaKnown RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
USB1-203ENST00000539737 SPG11Q96JI7 2443 aa14.14□□□□□ -0.15
USB1-203ENST00000539737 A0A087WUV0 522 aaPredicted RBP14.13□□□□□ -0.15
USB1-203ENST00000539737 TRAV17A0A0B4J275 112 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 A0A1W2PPV9 198 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 FITM1A5D6W6 292 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 FAM227AF5H4B4 570 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 PRPF4O43172 522 aaKnown RBP eCLIP14.13□□□□□ -0.15
USB1-203ENST00000539737 SLU7O95391 586 aaKnown RBP14.13□□□□□ -0.15
USB1-203ENST00000539737 RAB10P61026 200 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 HSF1Q00613 529 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 OCA2Q04671 838 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 ZNF460Q14592 562 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 PCOLCEQ15113 449 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 NDUFAF7Q7L592 441 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 CCDC91Q7Z6B0 441 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 ADAMTSL2Q86TH1 951 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 ZNF808Q8N4W9 903 aaPredicted RBP14.13□□□□□ -0.15
USB1-203ENST00000539737 OR2L3Q8NG85 312 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 ZNF480Q8WV37 535 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 ZFYVE21Q9BQ24 234 aa14.13□□□□□ -0.15
USB1-203ENST00000539737 MRPS30Q9NP92 439 aaKnown RBP14.13□□□□□ -0.15
USB1-203ENST00000539737 TRPC4Q9UBN4 977 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms