RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	KIR2DS5	Q14953	304 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SHB	Q15464	509 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ELAVL1	Q15717	326 aa	Known RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SPATS1	Q496A3	300 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	CCDC157	Q569K6	752 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	CTSL3P	Q5NE16	218 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TEDDM1	Q5T9Z0	273 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	GRTP1	Q5TC63	336 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	LGSN	Q5TDP6	509 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	METRNL	Q641Q3	311 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	LRRC8E	Q6NSJ5	796 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	FAM45BP	Q6NSW5	357 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TLDC1	Q6P9B6	456 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TTC23L	Q6PF05	361 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRPM8	Q7Z2W7	1104 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PIGW	Q7Z7B1	504 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZC3HC1	Q86WB0	502 aa	Known RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	LRRC34	Q8IZ02	419 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC25A45	Q8N413	288 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZBTB2	Q8N680	514 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ARL10	Q8N8L6	244 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PNPLA1	Q8N8W4	532 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	CCL4L1	Q8NHW4	92 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	MDM1	Q8TC05	714 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	FAM45A	Q8TCE6	357 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	MAPK15	Q8TD08	544 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF480	Q8WV37	535 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	DYDC1	Q8WWB3	177 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	STON2	Q8WXE9	905 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	DVL3	Q92997	716 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	NAT6	Q93015	286 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	MIEF2	Q96C03	454 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	CXorf40B	Q96DE9	158 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	LINC00615	Q96LM1	132 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	FOPNL	Q96NB1	174 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ANKRD27	Q96NW4	1050 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	BIRC8	Q96P09	236 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PAFAH2	Q99487	392 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	RBBP8	Q99708	897 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	P2RY12	Q9H244	342 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	COG4	Q9H9E3	785 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PPCS	Q9HAB8	311 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	BCO1	Q9HAY6	547 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PLAC1	Q9HBJ0	212 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRDM8	Q9NQV8	689 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	RXFP3	Q9NSD7	469 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	IMP3	Q9NV31	184 aa	Known RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC17A6	Q9P2U8	582 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TBC1D29	Q9UFV1	150 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC23A2	Q9UGH3	650 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	BAIAP2L1	Q9UHR4	511 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC39A10	Q9ULF5	831 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PSMD13	Q9UNM6	376 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	C15orf41	Q9Y2V0	281 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	HEBP2	Q9Y5Z4	205 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	PSAT1	Q9Y617	370 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	MUC3A	Q02505	3323 aa		4.18	□□□□□ -1.74
SNHG1-208	ENST00000538266	TDRD6	O60522	2096 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266		A0A0C4DFX4	3053 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZFC3H1	O60293	1989 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	IQANK1	A0A1B0GTG1	560 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CPED1	A4D0V7	1026 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SMIM23	A6NLE4	172 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CXorf49	A8MYA2	514 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRIM38	O00635	465 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRRG2	O14669	202 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RASGRF2	O14827	1237 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CLGN	O14967	610 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TNFSF14	O43557	240 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SGTA	O43765	313 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NUDT21	O43809	227 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SH3BP5	O60239	455 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLCO2B1	O94956	709 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	LDOC1	O95751	146 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	VIP	P01282	170 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	AHSG	P02765	367 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SHBG	P04278	402 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ITGA2B	P08514	1039 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	F7	P08709	466 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CBSL	P0DN79	551 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	MTHFD1	P11586	935 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ENO3	P13929	434 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CD59	P13987	128 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	STMN1	P16949	149 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CKMT2	P17540	419 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	FDXR	P22570	491 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CNTF	P26441	200 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NDUFS1	P28331	727 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TYK2	P29597	1187 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ALDH4A1	P30038	563 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CCR7	P32248	378 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CBS	P35520	551 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SERPINB8	P50452	374 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SERPINB9	P50453	376 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms