RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ISCA2Q86U28 154 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 LAPTM4BQ86VI4 370 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 ANKRD53Q8N9V6 530 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 TRPV3Q8NET8 790 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 TTLQ8NG68 377 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 MRRFQ96E11 262 aaKnown RBP13.07□□□□□ -0.32
TMEM258-203ENST00000535297 MOCOSQ96EN8 888 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-203ENST00000535297 EHD1Q9H4M9 534 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 IGSF5Q9NSI5 407 aa13.07□□□□□ -0.32
TMEM258-203ENST00000535297 PTBP2Q9UKA9 531 aaKnown RBP13.07□□□□□ -0.32
TMEM258-203ENST00000535297 SCN3AQ9NY46 2000 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 URADA6NGE7 173 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SGK494L7N484 410 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 MASP2O00187 686 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 H2AFYO75367 372 aaKnown RBP13.06□□□□□ -0.32
TMEM258-203ENST00000535297 RDH16O75452 317 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 WISP1O95388 367 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SERPIND1P05546 499 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 C2P06681 752 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 INHBAP08476 426 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 COX6A1P12074 109 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 ALOX12P18054 663 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 IL10P22301 178 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
TMEM258-203ENST00000535297 GMPRP36959 345 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 XCR1P46094 333 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 HSPA7P48741 367 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SERPINB9P50453 376 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 RBBP5Q15291 538 aaKnown RBP13.06□□□□□ -0.32
TMEM258-203ENST00000535297 PDK4Q16654 411 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 FAM83EQ2M2I3 478 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 TAOK1Q7L7X3 1001 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 LRRC70Q7Z2Q7 622 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 PDSS2Q86YH6 399 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 CENPLQ8N0S6 344 aaPredicted RBP13.06□□□□□ -0.32
TMEM258-203ENST00000535297 OR51Q1Q8NH59 317 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 RHEBL1Q8TAI7 183 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 UBTD2Q8WUN7 234 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 KCTD4Q8WVF5 259 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 EXT2Q93063 718 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 C8orf44Q96CB5 159 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 NXNL1Q96CM4 212 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 ATOH8Q96SQ7 321 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 ZNF552Q9H707 407 aaPredicted RBP13.06□□□□□ -0.32
TMEM258-203ENST00000535297 NT5DC2Q9H857 520 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 COPG2Q9UBF2 871 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 MKL2Q9ULH7 1088 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 NAALAD2Q9Y3Q0 740 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
TMEM258-203ENST00000535297 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 NBASA2RRP1 2371 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 LOC102723996A0A087X1L8 192 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 A0A096LPK6 155 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SYCE1LA8MT33 242 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SUPT3HB4E1H0 165 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 CLGNO14967 610 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 GALR3O60755 368 aaPredicted RBP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 ALOX12BO75342 701 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SUPT3HO75486 399 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SERPINA6P08185 405 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 KCNC1P48547 511 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 IRF9Q00978 393 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SLBPQ14493 270 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 NADK2Q4G0N4 442 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 IGFL3Q6UXB1 125 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 KRT78Q8N1N4 520 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 SNX31Q8N9S9 440 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 CREB3L4Q8TEY5 395 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 ISL2Q96A47 359 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 OR1F2PQ96R84 312 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 PAFAH2Q99487 392 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 MESP1Q9BRJ9 268 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 VN1R1Q9GZP7 353 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 LHPPQ9H008 270 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 CLK4Q9HAZ1 481 aaKnown RBP13.05□□□□□ -0.32
TMEM258-203ENST00000535297 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 RIC8BQ9NVN3 520 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
TMEM258-203ENST00000535297 IGHV1-45A0A0A0MS14 117 aa13.04□□□□□ -0.32
TMEM258-203ENST00000535297 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
TMEM258-203ENST00000535297 PYCARD-AS1I3L0S3 204 aa13.04□□□□□ -0.32
TMEM258-203ENST00000535297 UBXN8O00124 270 aa13.04□□□□□ -0.32
TMEM258-203ENST00000535297 CCNT2O60583 730 aaKnown RBP13.04□□□□□ -0.32
TMEM258-203ENST00000535297 JRKO75564 520 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms