RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NR4A3Q92570 626 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZDHHC12Q96GR4 267 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 TMED9Q9BVK6 235 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 PCDHB16Q9NRJ7 776 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 WASF2Q9Y6W5 498 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 A0A1B0GVT2 93 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 KANTRA0A1W2PQU2 76 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 TCRBV21S2A2A0A5A6 115 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 H6PDO95479 791 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC6A6P31641 620 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 MAGEA11P43364 429 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 PREPP48147 710 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 SUSD1Q6UWL2 747 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 TOMM5Q8N4H5 51 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 HRASLS2Q9NWW9 162 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 C2orf74A8MZ97 194 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 IRF5Q13568 498 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 PLEKHG6Q3KR16 790 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 TPRG1LQ5T0D9 272 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 OLFML1Q6UWY5 402 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ASB18Q6ZVZ8 466 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 OR4C15Q8NGM1 316 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 TMBIM1Q969X1 311 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 LRRC46Q96FV0 321 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 DLX3O60479 287 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 GBAP04062 536 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 KCNC3Q14003 757 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 RBM20Q5T481 1227 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 AQP11Q8NBQ7 271 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM203Q969S6 136 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 SMOQ99835 787 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 WDR77Q9BQA1 342 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 RNF11Q9Y3C5 154 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 KCTD3Q9Y597 815 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 PCDHGA10Q9Y5H3 936 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 CXorf49A8MYA2 514 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 SOX1O00570 391 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ADAMTS3O15072 1205 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 C6orf47O95873 294 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 DLDP09622 509 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ARF3P61204 181 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ARF1P84077 181 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 KCNJ11Q14654 390 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 PAQR7Q86WK9 346 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 CPNE8Q86YQ8 564 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 MMABQ96EY8 250 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 ACSL5Q9ULC5 683 aa17.6■□□□□ 0.41
SFSWAP-203ENST00000535236 RNF13O43567 381 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 CDC40O60508 579 aaKnown RBP eCLIP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 HTR1AP08908 422 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 CREB1P16220 341 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 GLP1RP43220 463 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 STC1P52823 247 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 CLRN1P58418 232 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 GALNT2Q10471 571 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 AAK1Q2M2I8 961 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 FAM214AQ32MH5 1076 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC9A4Q6AI14 798 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 MFSD2AQ8NA29 543 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 BORCS8Q96FH0 119 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 NCDNQ9UBB6 729 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 C14orf166Q9Y224 244 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 PCDHB14Q9Y5E9 798 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 SH3D21A4FU49 640 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 FZD9O00144 591 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 UFM1P61960 85 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 ID2Q02363 134 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 PLP2Q04941 152 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM115Q12893 351 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 METTL27Q8N6F8 245 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 STON2Q8WXE9 905 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 OTUB2Q96DC9 234 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC22A4Q9H015 551 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 TPT1P8Q9HAU6 139 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM233B4DJY2 109 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 NFKBIEO00221 500 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 KDM4BO94953 1096 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 C10orf82Q8WW14 230 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 EZH1Q92800 747 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 NINJ1Q92982 152 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 SH3YL1Q96HL8 342 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 RBMX2Q9Y388 322 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 BPNT1O95861 308 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 ODF4Q2M2E3 257 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 SAMD11Q96NU1 681 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 TSSK6Q9BXA6 273 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 CD244Q9BZW8 370 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 PRTFDC1Q9NRG1 225 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 NLE1Q9NVX2 485 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 ZDHHC2Q9UIJ5 367 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 WDR45Q9Y484 360 aa17.59■□□□□ 0.41
SFSWAP-203ENST00000535236 A0A1W2PPL8 197 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 TP53I11O14683 189 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 FARS2O95363 451 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 GATMP50440 423 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 LASP1Q14847 261 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms