RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CLYBLQ8N0X4 340 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 RPRMLQ8N4K4 120 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 MARVELD2Q8N4S9 558 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TMEM156Q8N614 296 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 CAMKVQ8NCB2 501 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 PLPP5Q8NEB5 264 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 OR5T3Q8NGG3 340 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 OR5M9Q8NGP3 310 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 SLC35B2Q8TB61 432 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 SREK1Q8WXA9 508 aaKnown RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 OLFM1Q99784 485 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 POLDIP3Q9BY77 421 aaKnown RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TP63Q9H3D4 680 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 LIME1Q9H400 295 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 BFARQ9NZS9 450 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 FBXW2Q9UKT8 454 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 EPN1Q9Y6I3 576 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 GRID2IPA4D2P6 1211 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 H3BMM5 538 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 FCHO1O14526 889 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 LCMT2O60294 686 aaKnown RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 DNAJB6O75190 326 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 FTCDO95954 541 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 F7P08709 466 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 HOXD4P09016 255 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TFEBP19484 476 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 MGAT1P26572 445 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 GRK3P35626 688 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 HNF4AP41235 474 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 NPY2RP49146 381 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 HLCSP50747 726 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 DGKQP52824 942 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 NUP107P57740 925 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 RPS15AP62244 130 aaKnown RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 BASP1P80723 227 aaKnown RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 RHAGQ02094 409 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 FOLH1Q04609 750 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TBX2Q13207 712 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TTLL9Q3SXZ7 439 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 CAPN13Q6MZZ7 669 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 CASC4Q6P4E1 433 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 PAOXQ6QHF9 649 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 UBE2R2Q712K3 238 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 GSTA5Q7RTV2 222 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 VN1R4Q7Z5H5 301 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 ASPGQ86U10 573 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 ZZZ3Q8IYH5 903 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 ARHGEF39Q8N4T4 335 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TC2NQ8N9U0 490 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 FBXO15Q8NCQ5 510 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 OR52N2Q8NGI0 321 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 MFSD3Q96ES6 412 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 BIRC8Q96P09 236 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 TRIM5Q9C035 493 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 ATG10Q9H0Y0 220 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC68Q9H2F9 335 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 KCNN3Q9UGI6 736 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 ERVK-11Q9UQG0 969 aa8.66□□□□□ -1.02
NEDD8-206ENST00000531430 KLF13Q9Y2Y9 288 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-206ENST00000531430 FAM166BA8MTA8 275 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 MAGEB17A8MXT2 336 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 CHST10O43529 356 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 LIASO43766 372 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 KIF5CO60282 957 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 B3GALT4O96024 378 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 ESR1P03372 595 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 FHP07954 510 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 ERGP11308 486 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 DNASE1P24855 282 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 COILP38432 576 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 NR0B1P51843 470 aaKnown RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 MLF1P58340 268 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 BTG2P78543 158 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 MEF2AQ02078 507 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 RELAQ04206 551 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 KCTD19Q17RG1 926 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 GXYLT1Q4G148 440 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 FBXW10Q5XX13 1052 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 ARHGAP11AQ6P4F7 1023 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 ACAD11Q709F0 780 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 PDSS2Q86YH6 399 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 MPP5Q8N3R9 675 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 PRELID2Q8N945 189 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 POGLUT1Q8NBL1 392 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 GOT1L1Q8NHS2 421 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 ELP5Q8TE02 316 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 LPGAT1Q92604 370 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 PEX13Q92968 403 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 TBC1D20Q96BZ9 403 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 SEC16BQ96JE7 1060 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 SLC30A3Q99726 388 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 IL22Q9GZX6 179 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC177Q9NQR7 707 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-206ENST00000531430 TREX1Q9NSU2 369 aa8.65□□□□□ -1.02
NEDD8-206ENST00000531430 PAK5Q9P286 719 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms