RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SLC32A1Q9H598 525 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 KIR3DX1Q9H7L2 352 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 OGFRQ9NZT2 677 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 TXNDC16Q9P2K2 825 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 LRIT1Q9P2V4 623 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 SLC39A10Q9ULF5 831 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 PCDHGA1Q9Y5H4 931 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 B3GALT1Q9Y5Z6 326 aa8.46□□□□□ -1.06
CCDC90B-217ENST00000530253 A0A1W2PQM1 296 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 CPED1A4D0V7 1026 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 ARHGEF33A8MVX0 844 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 POC1B-GALNT4F8VUJ3 575 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 IFRD1O00458 451 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 NTN3O00634 580 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 PHGDHO43175 533 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 B4GAT1O43505 415 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 PSIP1O75475 530 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 RFPL3O75679 317 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 C1orf105O95561 183 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 INHBAP08476 426 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 FTH1P19P0C7X4 201 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SLC35E2BP0CK96 405 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SAT1P21673 171 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SKIV2L2P42285 1042 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 MSH2P43246 934 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 BDKRB1P46663 353 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SERPINB9P50453 376 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 DUSP3P51452 185 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 RAB10P61026 200 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SIM1P81133 766 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 CFHR1Q03591 330 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 DLG1Q12959 904 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 ILKQ13418 452 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 RASA2Q15283 850 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 BEND6Q5SZJ8 279 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 UGT3A1Q6NUS8 523 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 TDRPQ86YL5 185 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 TBC1D21Q8IYX1 336 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 AVL9Q8NBF6 648 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 OR2W6PQ8NHA6 318 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 OR5K2Q8NHB8 316 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 EEF1AKMT1Q8WVE0 214 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 ZFPM2Q8WW38 1151 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 JPH3Q8WXH2 748 aaPredicted RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 DLG3Q92796 817 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 CXorf40BQ96DE9 158 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 LINGO1Q96FE5 620 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 PDLIM5Q96HC4 596 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 UBXN10Q96LJ8 280 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 FOXB1Q99853 325 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 CCDC3Q9BQI4 270 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 HGH1Q9BTY7 390 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 TBC1D10AQ9BXI6 508 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 MVB12BQ9H7P6 319 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SNX15Q9NRS6 342 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 CTNNAL1Q9UBT7 734 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 SLC24A2Q9UI40 661 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 ASF1AQ9Y294 204 aa8.45□□□□□ -1.06
CCDC90B-217ENST00000530253 LAMA5O15230 3695 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 IGSF10Q6WRI0 2623 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 IGHV1OR21-1A0A087WYE8 117 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 RHPN2P1A8MT19 583 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 GFYI3L273 518 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 MYO1CO00159 1063 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 RFPL1O75677 317 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 VIPP01282 170 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 ERGP11308 486 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 H2AFXP16104 143 aaPredicted RBP8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 STMN1P16949 149 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 CNTFP26441 200 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 NDUFS1P28331 727 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 CD1CP29017 333 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 PKLRP30613 574 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 GPR3P46089 330 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 SERPINB8P50452 374 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 PDX1P52945 283 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 CLDN6P56747 220 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 OR1D5P58170 312 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 ABRQ12979 859 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 SQSTM1Q13501 440 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 PPP1R3AQ16821 1122 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 LRRC8EQ6NSJ5 796 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 TIFABQ6ZNK6 161 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 TMPRSS9Q7Z410 1059 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 DCUN1D3Q8IWE4 304 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 CENPLQ8N0S6 344 aaPredicted RBP8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 IQCKQ8N0W5 287 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 OR52E1Q8NGJ3 308 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 DENND1AQ8TEH3 1009 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 RSC1A1Q92681 617 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 SH3KBP1Q96B97 665 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 TMEM109Q9BVC6 243 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 TFB2MQ9H5Q4 396 aaKnown RBP8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 STN1Q9H668 368 aaKnown RBP8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 PSMC3IPQ9P2W1 217 aaPredicted RBP8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 ANGPTL2Q9UKU9 493 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 ICKQ9UPZ9 632 aa8.44□□□□□ -1.06
CCDC90B-217ENST00000530253 HEBP2Q9Y5Z4 205 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms