RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PRSS41Q7RTY9 318 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 TMPRSS11BQ86T26 416 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 PDSS2Q86YH6 399 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 RBMXL3Q8N7X1 1067 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 ANKRD53Q8N9V6 530 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 TTLQ8NG68 377 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 RHEBL1Q8TAI7 183 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 PNPLA2Q96AD5 504 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 MOCOSQ96EN8 888 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 OR1F2PQ96R84 312 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 TMEM79Q9BSE2 394 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 UNKQ9C0B0 810 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 LHPPQ9H008 270 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SPNS1Q9H2V7 528 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 CDC42EP4Q9H3Q1 356 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 DNAJC11Q9NVH1 559 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 WWOXQ9NZC7 414 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 CD274Q9NZQ7 290 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 MKL2Q9ULH7 1088 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 RNF112Q9ULX5 631 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NAALAD2Q9Y3Q0 740 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 IGHV1-45A0A0A0MS14 117 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 NSG1A0A0A6YYJ2 146 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 HMX2A2RU54 273 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 SGK494L7N484 410 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 MASP2O00187 686 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 CLGNO14967 610 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 GALR3O60755 368 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 KERAO60938 352 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ALOX12BO75342 701 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 SORBS2O94875 1100 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 SERPIND1P05546 499 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 C2P06681 752 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 SMIM10L1P0DMW3 83 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 COX6A1P12074 109 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ICAM2P13598 275 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 TFEBP19484 476 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 VARSP26640 1264 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 XCR1P46094 333 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 AP2B1P63010 937 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 DLG1Q12959 904 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 RAPSNQ13702 412 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 RBBP5Q15291 538 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 FAM83EQ2M2I3 478 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 C18orf21Q32NC0 220 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 MROH9Q5TGP6 573 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 AGAP7PQ5VUJ5 663 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 IGFL2Q6UWQ7 119 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 TMIGD1Q6UXZ0 262 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 RIPOR1Q6ZS17 1223 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 PARP9Q8IXQ6 854 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 KBTBD2Q8IY47 623 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 KRT78Q8N1N4 520 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZADH2Q8N4Q0 377 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 PLPP5Q8NEB5 264 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZCCHC10Q8TBK6 192 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 UTP15Q8TED0 518 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 NXNL1Q96CM4 212 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 WDR34Q96EX3 536 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 SMIM10Q96HG1 83 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 AGAP4Q96P64 663 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 LMF1Q96S06 567 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ATOH8Q96SQ7 321 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 CD244Q9BZW8 370 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 TRIM4Q9C037 500 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZNF700Q9H0M5 742 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 CLMPQ9H6B4 373 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 ALG9Q9H6U8 611 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 IGSF5Q9NSI5 407 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 RIC8BQ9NVN3 520 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 NUDT4Q9NZJ9 180 aa11.45□□□□□ -0.58
TRAPPC4-209ENST00000528230 TTLL8A6PVC2 850 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 SYCE1LA8MT33 242 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 RDH16O75452 317 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 SERPINA7P05543 415 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 C8orf89P0DMQ9 161 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 TYK2P29597 1187 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 HPDP32754 393 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 CASP2P42575 452 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 HSPA7P48741 367 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 CD97P48960 835 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 AGTR2P50052 363 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 SERPINB9P50453 376 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 PCDH1Q08174 1060 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 Q0VFX4 171 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 HYAL2Q12891 473 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 LAPTM5Q13571 262 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 E2F2Q14209 437 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 ACAP2Q15057 778 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 TBCCQ15814 346 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 PDK4Q16654 411 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 SLC6A19Q695T7 634 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 LRRC70Q7Z2Q7 622 aa11.44□□□□□ -0.58
TRAPPC4-209ENST00000528230 IFT20Q8IY31 132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms