RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MOCOSQ96EN8 888 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 OR1F2PQ96R84 312 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 CLK4Q9HAZ1 481 aaKnown RBP31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 ZBTB20Q9HC78 741 aaPredicted RBP31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 GPRC5BQ9NZH0 403 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 HCN3Q9P1Z3 774 aa31.24■■■□□ 2.59
SSSCA1-205ENST00000527920 DOCK10Q96BY6 2186 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 GALR3O60755 368 aaPredicted RBP31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 RDH16O75452 317 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 SERPINA7P05543 415 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 C8orf89P0DMQ9 161 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 ALOX12P18054 663 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 CRABP2P29373 138 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 EFNA3P52797 238 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 AP2B1P63010 937 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 PLEKHN1Q494U1 663 aaPredicted RBP31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 SULT1C3Q6IMI6 304 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 SLCO4C1Q6ZQN7 724 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 ABHD13Q7L211 337 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 CCDC91Q7Z6B0 441 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 IQCKQ8N0W5 287 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 ANKRD53Q8N9V6 530 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 PDPRQ8NCN5 879 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 METTL21AQ8WXB1 218 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 ZNF592Q92610 1267 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 WDR77Q9BQA1 342 aaPredicted RBP31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 UNKQ9C0B0 810 aaKnown RBP31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 TSPYL1Q9H0U9 437 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 COPG2Q9UBF2 871 aa31.23■■■□□ 2.59
SSSCA1-205ENST00000527920 RELNP78509 3460 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 URADA6NGE7 173 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 FAM155BO75949 473 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 PRR35P0CG20 571 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 SLC35E2BP0CK96 405 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 GSTM2P28161 218 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 EEF1A2Q05639 463 aaKnown RBP31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 CDC16Q13042 620 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 PCOLCEQ15113 449 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 OR4D1Q15615 310 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 ISLR2Q6UXK2 745 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 SEC16BQ96JE7 1060 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 LMF1Q96S06 567 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 SLC6A16Q9GZN6 736 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 PITHD1Q9GZP4 211 aaPredicted RBP31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 EHD1Q9H4M9 534 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 EPS8L2Q9H6S3 715 aa31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 C19orf25Q9UFG5 118 aaPredicted RBP31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 MTRF1LQ9UGC7 380 aaKnown RBP31.22■■■□□ 2.59
SSSCA1-205ENST00000527920 VPS4BO75351 444 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 JRKO75564 520 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 C1GALT1C1LP0DN25 315 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 ICAM2P13598 275 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 GDF5P43026 501 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 SLMAPQ14BN4 828 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 GLE1Q53GS7 698 aaKnown RBP31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 CRB2Q5IJ48 1285 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 FAAH2Q6GMR7 532 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 TTLQ8NG68 377 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 CYTH2Q99418 400 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 TMEM79Q9BSE2 394 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 TUBB6Q9BUF5 446 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 ILKAPQ9H0C8 392 aaPredicted RBP31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 WWOXQ9NZC7 414 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 LUZP4Q9P127 313 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 VPS4AQ9UN37 437 aa31.21■■■□□ 2.59
SSSCA1-205ENST00000527920 NCF1BA6NI72 391 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 NCF1CA8MVU1 366 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 TAPBPO15533 448 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 SERPIND1P05546 499 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 SERPINA6P08185 405 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 NCF1P14598 390 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 MFAP5Q13361 173 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 C18orf21Q32NC0 220 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 MINDY4Q4G0A6 757 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 NMRAL1Q9HBL8 299 aa31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 PTBP2Q9UKA9 531 aaKnown RBP31.2■■■□□ 2.59
SSSCA1-205ENST00000527920 CNTRLQ7Z7A1 2325 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CLEC18AA5D8T8 446 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 H2AFYO75367 372 aaKnown RBP31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 PHBP35232 272 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 AGTR2P50052 363 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 EFTUD2Q15029 972 aaKnown RBP eCLIP31.19■■■□□ 2.583e-6■■■■■ 34.6
SSSCA1-205ENST00000527920 DEFB134Q4QY38 66 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CLEC18BQ6UXF7 455 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 RAPH1Q70E73 1250 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CMC1Q7Z7K0 106 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 TBC1D1Q86TI0 1168 aaPredicted RBP31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 NOA1Q8NC60 698 aaKnown RBP31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CLEC18CQ8NCF0 446 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 STAG3L4Q8TBR4 150 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 UTP15Q8TED0 518 aaKnown RBP31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CREB3L4Q8TEY5 395 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 PSMF1Q92530 271 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 IMMP1LQ96LU5 166 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 NT5DC2Q9H857 520 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 DNAJC11Q9NVH1 559 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 DMGDHQ9UI17 866 aaKnown RBP31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 RNF112Q9ULX5 631 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 LRRK2Q5S007 2527 aa31.19■■■□□ 2.58
SSSCA1-205ENST00000527920 CCDC189A1A4V9 331 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms