RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SPATS1Q496A3 300 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CTSL3PQ5NE16 218 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 TMEM214Q6NUQ4 689 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 CEACAM20Q6UY09 585 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PTCHD4Q6ZW05 846 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 GALNT5Q7Z7M9 940 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 SIX5Q8N196 739 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 RLN3Q8WXF3 142 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 TMEM184CQ9NVA4 438 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 EMCNQ9ULC0 261 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 SCN1AP35498 2009 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 MAN1A2O60476 641 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 HLA-DQA2P01906 255 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PEX2P28328 305 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 HTR6P50406 440 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ZNF33BQ06732 778 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 DGCR6Q14129 220 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ADGRE1Q14246 886 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PUS10Q3MIT2 529 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 HSF5Q4G112 596 aaPredicted RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 TMEM35AQ53FP2 167 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ANKRD26P1Q6NSI1 321 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ATOH8Q96SQ7 321 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 KCNH6Q9H252 994 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 EXO5Q9H790 373 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CFL2Q9Y281 166 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 COQ9O75208 318 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 C8orf89P0DMQ9 161 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 MASP1P48740 699 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 MLIPQ5VWP3 458 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 Q6ZNB5 142 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 DTNBP1Q96EV8 351 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 BTBD9Q96Q07 612 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 HDAC8Q9BY41 377 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 CCNB1IP1Q9NPC3 277 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 INTS6Q9UL03 887 aaKnown RBP14.52□□□□□ -0.08
USP47-207ENST00000527733 DMTF1Q9Y222 760 aa14.52□□□□□ -0.08
USP47-207ENST00000527733 URB1O60287 2271 aaKnown RBP14.52□□□□□ -0.08
USP47-207ENST00000527733 UGDHO60701 494 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 TFPIP10646 304 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 ZNF630Q2M218 657 aaPredicted RBP14.52□□□□□ -0.09
USP47-207ENST00000527733 TIMM50Q3ZCQ8 353 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 RTL4Q6ZR62 310 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 LUZP2Q86TE4 346 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 RASGEF1AQ8N9B8 481 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 EBF2Q9HAK2 575 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 CLK4Q9HAZ1 481 aaKnown RBP14.52□□□□□ -0.09
USP47-207ENST00000527733 PDFQ9HBH1 243 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 ZNF229Q9UJW7 825 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 GREB1LQ9C091 1923 aaPredicted RBP14.52□□□□□ -0.09
USP47-207ENST00000527733 GLOD5A6NK44 160 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 E7EQ34 232 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 REM1O75628 298 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 PRKD3O94806 890 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 CD6P30203 668 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 MTTPP55157 894 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 DEFB134Q4QY38 66 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 LETMD1Q6P1Q0 360 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 OR4K14Q8NGD5 310 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 ZDHHC1Q8WTX9 485 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 MYADMQ96S97 322 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 ERGIC3Q9Y282 383 aa14.52□□□□□ -0.09
USP47-207ENST00000527733 FAM86C2PA6NEL3 165 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 OR52A4PA6NMU1 304 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 A8MUA0 341 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 M0QX08 132 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 GADD45GO95257 159 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 IFNGP01579 166 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 DCDC1P59894 354 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 GRHL2Q6ISB3 625 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 RFLNAQ6ZTI6 216 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 ASB11Q8WXH4 323 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 UBXN10Q96LJ8 280 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 TGM7Q96PF1 710 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 TIMM29Q9BSF4 260 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 PHF7Q9BWX1 381 aaPredicted RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 ZNF860A6NHJ4 632 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 CCNB2O95067 398 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 IL3P08700 152 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 CR2P20023 1033 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 ADARP55265 1226 aaKnown RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 LGALS3BPQ08380 585 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 NRROSQ86YC3 692 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 DCP2Q8IU60 420 aaKnown RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 TAS2R9Q9NYW1 312 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 RAB26Q9ULW5 256 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 NR1H2P55055 460 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 CLDN8P56748 225 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 ARHGAP19Q14CB8 494 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 MLF2Q15773 248 aaPredicted RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 KRTCAP2Q8N6L1 136 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 OLIG1Q8TAK6 271 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 PIGXQ8TBF5 258 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 UBE2ZQ9H832 354 aaPredicted RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 NME6O75414 186 aaPredicted RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 BCL10O95999 233 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 DEFA1P59665 94 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 DEFA3P59666 94 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 RHDQ02161 417 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms