RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TMEM205Q6UW68 189 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 TMPRSS11BQ86T26 416 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 PDSS2Q86YH6 399 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 SPATA6LQ8N4H0 392 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 SIRT6Q8N6T7 355 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 CYTH2Q99418 400 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 AIF1LQ9BQI0 150 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 MCMBPQ9BTE3 642 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 SARGQ9BW04 601 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 SPNS1Q9H2V7 528 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 POPDC3Q9HBV1 291 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 KCNE2Q9Y6J6 123 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 IGHV3-20A0A0C4DH32 117 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 PHGDHO43175 533 aaKnown RBP17.53■□□□□ 0.4
CAPN1-203ENST00000525013 WDR47O94967 919 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 ICAM2P13598 275 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 SCTRP47872 440 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 HNMTP50135 292 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 EFNA3P52797 238 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 ARG2P78540 354 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 CDKL1Q00532 357 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 CDC16Q13042 620 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 PWP1Q13610 501 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 ZNF169Q14929 603 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-203ENST00000525013 PCOLCEQ15113 449 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 RBBP5Q15291 538 aaKnown RBP17.53■□□□□ 0.4
CAPN1-203ENST00000525013 TLR1Q15399 786 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 NR6A1Q15406 480 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 TRADDQ15628 312 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 NXPE4Q6UWF7 544 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 RIPOR1Q6ZS17 1223 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 LANCL3Q6ZV70 420 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 PEX11GQ96HA9 241 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 RBCK1Q9BYM8 510 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 DERL2Q9GZP9 239 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 PELI2Q9HAT8 420 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 C19orf25Q9UFG5 118 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-203ENST00000525013 ZFP69BQ9UJL9 534 aa17.53■□□□□ 0.4
CAPN1-203ENST00000525013 DYTNA2CJ06 578 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 NCF1BA6NI72 391 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 FAM159BA6NKW6 160 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 NCF1CA8MVU1 366 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CDC123O75794 336 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 SEC24DO94855 1032 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 GSTA2P09210 222 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 ZNF888P0CJ79 500 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CCDC166P0CW27 439 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 ITGAMP11215 1152 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 NCF1P14598 390 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 ALOX12P18054 663 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 AHRP35869 848 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 GP5P40197 560 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 HNF4AP41235 474 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 GDF5P43026 501 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 MAGEA4P43358 317 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 GPX6P59796 221 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 AP2B1P63010 937 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 SKP1P63208 163 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 REEP5Q00765 189 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 C18orf21Q32NC0 220 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 DEFB134Q4QY38 66 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CYS1Q717R9 158 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CPEB2Q7Z5Q1 589 aaKnown RBP17.52■□□□□ 0.4
CAPN1-203ENST00000525013 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CATSPER1Q8NEC5 780 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 OR5T3Q8NGG3 340 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 PRR7Q8TB68 274 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 FBXO25Q8TCJ0 367 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 PSMF1Q92530 271 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 RBBP8Q99708 897 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 TUBB6Q9BUF5 446 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 AGPAT4Q9NRZ5 378 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 PLA2G3Q9NZ20 509 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 NTNG1Q9Y2I2 539 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 MAST4O15021 2626 aa17.52■□□□□ 0.4
CAPN1-203ENST00000525013 CPAMD8Q8IZJ3 1885 aa17.52■□□□□ 0.39
CAPN1-203ENST00000525013 POLEQ07864 2286 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 GALR3O60755 368 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-203ENST00000525013 H2AFYO75367 372 aaKnown RBP17.51■□□□□ 0.39
CAPN1-203ENST00000525013 B3GALT4O96024 378 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 CYC1P08574 325 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 STMN1P16949 149 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 OLR1P78380 273 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 TGFBIQ15582 683 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 KBTBD12Q3ZCT8 623 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 ABHD13Q7L211 337 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 GPSM1Q86YR5 675 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 AFAP1L2Q8N4X5 818 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 PPM1NQ8N819 430 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 NT5CQ8TCD5 201 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 RHBDF1Q96CC6 855 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 IMMP1LQ96LU5 166 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 GPR22Q99680 433 aa17.51■□□□□ 0.39
CAPN1-203ENST00000525013 DIDO1Q9BTC0 2240 aaKnown RBP17.51■□□□□ 0.39
CAPN1-203ENST00000525013 BLACEA4D250 179 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 A8MUI8 341 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 CHST10O43529 356 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 WISP3O95389 354 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 F10P00742 488 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 GNAZP19086 355 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms