RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TSEN15Q8WW01 171 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 SSMEM1Q8WWF3 244 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PYCR2Q96C36 320 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PBKQ96KB5 322 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 GPR137Q96N19 417 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 RPRD1AQ96P16 312 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 OR14A2Q96R54 314 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PANX2Q96RD6 677 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 PANX1Q96RD7 426 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 MTERF1Q99551 399 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 RTP3Q9BQQ7 232 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CBWD1Q9BRT8 395 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 TRMT61BQ9BVS5 477 aaKnown RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 SGPP1Q9BX95 441 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 CIPCQ9C0C6 399 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 WWP1Q9H0M0 922 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 C8orf33Q9H7E9 229 aaPredicted RBP3.79□□□□□ -1.8
SKP1-209ENST00000522552 SPACA1Q9HBV2 294 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 LZTFL1Q9NQ48 299 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 KLHL13Q9P2N7 655 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 SLC9A8Q9Y2E8 581 aa3.79□□□□□ -1.8
SKP1-209ENST00000522552 FNDC1Q4ZHG4 1894 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 TRAV24A0A0B4J272 114 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 TMEM191CA6NGB0 347 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 F8VVB4 439 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 F8VWA3 439 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 H0YIZ8 118 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 EEF2KO00418 725 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 ARPC3O15145 178 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 RNF13O43567 381 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 DFNA5O60443 496 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 BCAS1O75363 584 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 CDKL5O76039 1030 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SYNGR4O95473 234 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CPNE6O95741 557 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SFTPBP07988 381 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 TMEM191BP0C7N4 346 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SMIM18P0DKX4 95 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CETPP11597 493 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CYP3A5P20815 502 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 UQCRC2P22695 453 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 TUBG1P23258 451 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 NMT1P30419 496 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 RPL21P46778 160 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 NUMBP49757 651 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CCT8P50990 548 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 MMP15P51511 669 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 HERV-K104P63124 156 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 XIAPP98170 497 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 PDE1BQ01064 536 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CSTF1Q05048 431 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 CRYZQ08257 329 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 ILF2Q12905 390 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 MLANAQ16655 118 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 MTHFSDQ2M296 383 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 GAGE2EQ4V326 116 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SYT14P1Q58G82 188 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 AWAT1Q58HT5 328 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 LIPKQ5VXJ0 399 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 PYHIN1Q6K0P9 492 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ZSCAN25Q6NSZ9 544 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 GAGE2AQ6NT46 116 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 UGT3A1Q6NUS8 523 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ERICH5Q6P6B1 374 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 TMEM65Q6PI78 240 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CORO6Q6QEF8 472 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 C6orf89Q6UWU4 347 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CYB5R4Q7L1T6 521 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ANKRD33Q7Z3H0 272 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 WDR53Q7Z5U6 358 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 YRDCQ86U90 279 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 CHSY1Q86X52 802 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ERO1BQ86YB8 467 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 FAM114A1Q8IWE2 563 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.78□□□□□ -1.8
SKP1-209ENST00000522552 ARL14EPQ8N8R7 260 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 BMPERQ8N8U9 685 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ANKFN1Q8N957 763 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 SPATA4Q8NEY3 305 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 GPRC5AQ8NFJ5 357 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 OR5D13Q8NGL4 314 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 MCUR1Q96AQ8 359 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 PTCD3Q96EY7 689 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 MSANTD3Q96H12 275 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 MARK4Q96L34 752 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 CCNL2Q96S94 520 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 LLPHQ9BRT6 129 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 GPR87Q9BY21 358 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 ZNF768Q9H5H4 540 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 SLA2Q9H6Q3 261 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 TUBG2Q9NRH3 451 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 KLHL28Q9NXS3 571 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 OR6C2Q9NZP2 312 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 PDP1Q9P0J1 537 aaPredicted RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 WNT16Q9UBV4 365 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 PEF1Q9UBV8 284 aaKnown RBP3.78□□□□□ -1.8
SKP1-209ENST00000522552 SEC14L3Q9UDX4 400 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 GAGE2DQ9UEU5 116 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms