RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LRRC4CQ9HCJ2 640 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 RIC8BQ9NVN3 520 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 HCN3Q9P1Z3 774 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 NAALAD2Q9Y3Q0 740 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 PCDHGA10Q9Y5H3 936 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 CSAG2Q9Y5P2 127 aa16.12■□□□□ 0.17
SQLE-205ENST00000521232 HIVEP3Q5T1R4 2406 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 TCP11X1B4DZS4 312 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 NDUFS4O43181 175 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 ICAM2P13598 275 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 IL10P22301 178 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 XCR1P46094 333 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 SLC6A12P48065 614 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 REEP5Q00765 189 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 GUCY2DQ02846 1103 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 MFAP5Q13361 173 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 TGFBIQ15582 683 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 ZKSCAN8Q15776 578 aaPredicted RBP16.11■□□□□ 0.17
SQLE-205ENST00000521232 GRTP1Q5TC63 336 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 FRA10AC1Q70Z53 315 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 AIF1LQ9BQI0 150 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 TUBB6Q9BUF5 446 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 SLC29A3Q9BZD2 475 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 ASF1BQ9NVP2 202 aa16.11■□□□□ 0.17
SQLE-205ENST00000521232 SPTAN1Q13813 2472 aaKnown RBP16.11■□□□□ 0.17
SQLE-205ENST00000521232 UTP20O75691 2785 aaKnown RBP16.11■□□□□ 0.17
SQLE-205ENST00000521232 MAST4O15021 2626 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 GALR3O60755 368 aaPredicted RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 RDH16O75452 317 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 CCDC166P0CW27 439 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 CD1DP15813 335 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 STMN1P16949 149 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 ALOX12P18054 663 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 SPRP35270 261 aaPredicted RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 SOX11P35716 441 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 GGT5P36269 586 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 GLRBP48167 497 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 ATP6V0D1P61421 351 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 CKAP4Q07065 602 aaKnown RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 KBTBD12Q3ZCT8 623 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 MINDY4Q4G0A6 757 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 CDKL4Q5MAI5 379 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 NIPAL1Q6NVV3 410 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 LINC00696Q6ZRV3 163 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 CPEB2Q7Z5Q1 589 aaKnown RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 SPATA6LQ8N4H0 392 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 ANKRD53Q8N9V6 530 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 PLPP5Q8NEB5 264 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 TRPV3Q8NET8 790 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 BRIX1Q8TDN6 353 aaKnown RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 UBXN10Q96LJ8 280 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 OR1F2PQ96R84 312 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 MAP10Q9P2G4 905 aa16.1■□□□□ 0.17
SQLE-205ENST00000521232 COPG1Q9Y678 874 aaKnown RBP16.1■□□□□ 0.17
SQLE-205ENST00000521232 SPTBN1Q01082 2364 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 POLEQ07864 2286 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 CTAGE15A4D2H0 777 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 OR2W5A6NFC9 320 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 PHGDHO43175 533 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 SERPIND1P05546 499 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 SMIM10L1P0DMW3 83 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 GNAZP19086 355 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 GDF5P43026 501 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 TSFMP43897 325 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 RAB10P61026 200 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 AP2B1P63010 937 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 RGS1Q08116 209 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 HYAL2Q12891 473 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 TLR1Q15399 786 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 C18orf21Q32NC0 220 aaPredicted RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 B3GNTL1Q67FW5 361 aaPredicted RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 SLCO4C1Q6ZQN7 724 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 TMPRSS11BQ86T26 416 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 CTAGE6Q86UF2 777 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 CCDC25Q86WR0 208 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 TCAIMQ8N3R3 496 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 FBF1Q8TES7 1133 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 HAS2Q92819 552 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 SMIM10Q96HG1 83 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 LRRC1Q9BTT6 524 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 UNKQ9C0B0 810 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 SLC6A16Q9GZN6 736 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 CLK4Q9HAZ1 481 aaKnown RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 LANCL2Q9NS86 450 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 PTGFRNQ9P2B2 879 aa16.09■□□□□ 0.17
SQLE-205ENST00000521232 C19orf25Q9UFG5 118 aaPredicted RBP16.09■□□□□ 0.17
SQLE-205ENST00000521232 URADA6NGE7 173 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 TAPBPO15533 448 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 DNAJB6O75190 326 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 WFS1O76024 890 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 WDR47O94967 919 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 CBX6O95503 412 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 CELA2AP08217 269 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 C1GALT1C1LP0DN25 315 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 STX2P32856 288 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 AGTR2P50052 363 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 SKP1P63208 163 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 SLC7A5Q01650 507 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms