RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TXNDC8Q6A555 127 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 XAF1Q6GPH4 301 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ERICH5Q6P6B1 374 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SHQ1Q6PI26 577 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 BRAT1Q6PJG6 821 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.88□□□□□ -1.63
SDC2-204ENST00000519914 KCTD8Q6ZWB6 473 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TMPRSS7Q7RTY8 843 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 C11orf74Q86VG3 221 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 RALGPS2Q86X27 583 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 HIPK1Q86Z02 1210 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ADHFE1Q8IWW8 467 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TMEM132CQ8N3T6 1108 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TRAM1L1Q8N609 369 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 DDHD1Q8NEL9 900 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 OR8J2Q8NGG1 315 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 OR10A6Q8NH74 314 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 WDR20Q8TBZ3 569 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 MAGEE2Q8TD90 523 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 CYGBQ8WWM9 190 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 GIMAP1Q8WWP7 306 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 STARD8Q92502 1023 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 MRPS31Q92665 395 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 TIFAQ96CG3 184 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 WDR34Q96EX3 536 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SLC47A1Q96FL8 570 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PYURFQ96I23 114 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CAPNS2Q96L46 248 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 RNF145Q96MT1 663 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 COG8Q96MW5 612 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ASB16Q96NS5 453 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 VPS35Q96QK1 796 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 MBOAT4Q96T53 435 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 EGFL8Q99944 293 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TM6SF2Q9BZW4 377 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 IKZF5Q9H5V7 419 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ACTR8Q9H981 624 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CXorf21Q9HAI6 301 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 BRF2Q9HAW0 419 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PLGRKTQ9HBL7 147 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 SARS2Q9NP81 518 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 SPATA6Q9NWH7 488 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 FAM118AQ9NWS6 357 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 FAM120CQ9NX05 1096 aaKnown RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 KLQ9UEF7 1012 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 DUSP13Q9UII6 198 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TMEFF2Q9UIK5 374 aaPredicted RBP4.88□□□□□ -1.63
SDC2-204ENST00000519914 C3orf18Q9UK00 162 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 TMPRSS11EQ9UL52 423 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 CLEC4EQ9ULY5 219 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PPT2Q9UMR5 302 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 PCDHB14Q9Y5E9 798 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 LRRK1Q38SD2 2015 aa4.88□□□□□ -1.63
SDC2-204ENST00000519914 KIAA1549LQ6ZVL6 1849 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 MUC22E2RYF6 1773 aaPredicted RBP4.87□□□□□ -1.63
SDC2-204ENST00000519914 NUP214P35658 2090 aaPredicted RBP4.87□□□□□ -1.63
SDC2-204ENST00000519914 TRAV19A0A0A6YYK7 116 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 A0A0J9YVX5 310 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 A0A0U1RQS6 177 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 SH3PXD2BA1X283 911 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 CCDC160A6NGH7 325 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 A8MVJ9 347 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 FAM25EA8MYX2 175 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 UPK3BL1B0FP48 263 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 UPK3BL2E5RIL1 263 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 G3V2T6 193 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 H0YIV9 168 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PSMD11O00231 422 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 LEFTY2O00292 366 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PRRG1O14668 218 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 TEX28O15482 410 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 TPST1O60507 370 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PRAMEF4O60810 478 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 FKTNO75072 461 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 SEC22BO75396 215 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 GUCA1CO95843 209 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PDYNP01213 254 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 RB1P06400 928 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 POU2F2P09086 479 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 LINC00271P0C7V0 271 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 CYP2A6P11509 494 aaPredicted RBP4.87□□□□□ -1.63
SDC2-204ENST00000519914 ATP1B2P14415 290 aaPredicted RBP4.87□□□□□ -1.63
SDC2-204ENST00000519914 PTPN2P17706 415 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PRPS1L1P21108 318 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PCMT1P22061 227 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 NFKBIAP25963 317 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 GABRR2P28476 465 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 HLA-FP30511 346 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 VIPR1P32241 457 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 S100A5P33763 92 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 S100A3P33764 101 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 DCTP40126 519 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 HNF4AP41235 474 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 LINC00310P59036 64 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 PFN3P60673 137 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 ISL1P61371 349 aa4.87□□□□□ -1.63
SDC2-204ENST00000519914 POLR2LP62875 67 aaKnown RBP4.87□□□□□ -1.63
SDC2-204ENST00000519914 HMGCS1Q01581 520 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms