RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PRR30Q53SZ7 412 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 GRTP1Q5TC63 336 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 NXPE4Q6UWF7 544 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 PDSS2Q86YH6 399 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 KLHDC8AQ8IYD2 350 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ZADH2Q8N4Q0 377 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 AFAP1L2Q8N4X5 818 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 CISD2Q8N5K1 135 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ANKRD53Q8N9V6 530 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 PLPP5Q8NEB5 264 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 CATSPER1Q8NEC5 780 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 SLC5A11Q8WWX8 675 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 CDKL2Q92772 493 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 SNRNP40Q96DI7 357 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 VPS50Q96JG6 964 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 UBXN10Q96LJ8 280 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 GPR22Q99680 433 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 RBBP8Q99708 897 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 FAM129AQ9BZQ8 928 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 LHPPQ9H008 270 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF700Q9H0M5 742 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 RAB17Q9H0T7 212 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF160Q9HCG1 818 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ZDHHC18Q9NUE0 388 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 MKL2Q9ULH7 1088 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 B3GNT3Q9Y2A9 372 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 CSAG2Q9Y5P2 127 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 KALRNO60229 2985 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 BSNQ9UPA5 3926 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 IGHV1-45A0A0A0MS14 117 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 NSG1A0A0A6YYJ2 146 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PRAMEF4O60810 478 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 H2AFYO75367 372 aaKnown RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 ALPPP05187 535 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PRR35P0CG20 571 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 ACPPP15309 386 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CD1DP15813 335 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CXCR2P25025 360 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 SPRP35270 261 aaPredicted RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 AHRP35869 848 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 GGT5P36269 586 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 GP5P40197 560 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 HNMTP50135 292 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 SLC12A2P55011 1212 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 DLG1Q12959 904 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PCOLCEQ15113 449 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 AGAP7PQ5VUJ5 663 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PRAMEF9Q5VWM5 478 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 SLCO4C1Q6ZQN7 724 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 ISCA2Q86U28 154 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CUZD1Q86UP6 607 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 LCA5Q86VQ0 697 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CCDC25Q86WR0 208 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CTAGE3PQ8IX95 158 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 KBTBD2Q8IY47 623 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PPM1NQ8N819 430 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 GALNT11Q8NCW6 608 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 DNAJB14Q8TBM8 379 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 NT5CQ8TCD5 201 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 FBF1Q8TES7 1133 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CREB3L4Q8TEY5 395 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 ESAMQ96AP7 390 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 TSNARE1Q96NA8 513 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 AGAP4Q96P64 663 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 BARD1Q99728 777 aaKnown RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 EGFL8Q99944 293 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 VN1R1Q9GZP7 353 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 AICDAQ9GZX7 198 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 KLHL31Q9H511 634 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PELI2Q9HAT8 420 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 ANKHQ9HCJ1 492 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 C14orf105Q9NVL8 296 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 ASF1BQ9NVP2 202 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 ZFP69BQ9UJL9 534 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 PTBP2Q9UKA9 531 aaKnown RBP8.83□□□□□ -1
HDAC3-215ENST00000519474 NAALAD2Q9Y3Q0 740 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 CFAP46Q8IYW2 2715 aa8.83□□□□□ -1
HDAC3-215ENST00000519474 IGHV3-20A0A0C4DH32 117 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ESYT3A0FGR9 886 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 HMX2A2RU54 273 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 PABPN1LA6NDY0 278 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 TCP11X1B4DZS4 312 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 MAP2K7O14733 419 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 PCDH17O14917 1159 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 CHST10O43529 356 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 GALR3O60755 368 aaPredicted RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 VPS4BO75351 444 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 WDR47O94967 919 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 CBX6O95503 412 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 SERPIND1P05546 499 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 CELA2AP08217 269 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms