RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SERPINA7P05543 415 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 UQCRHP07919 91 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 PRR35P0CG20 571 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 GNAZP19086 355 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 GNLYP22749 145 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 GDF5P43026 501 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 UQCRFS1P47985 274 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 EFNA3P52797 238 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 ATP6V0D1P61421 351 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 UBAP2LQ14157 1087 aaKnown RBP23.15■■□□□ 1.3
SNF8-213ENST00000514929 RBBP5Q15291 538 aaKnown RBP23.15■■□□□ 1.3
SNF8-213ENST00000514929 C18orf21Q32NC0 220 aaPredicted RBP23.15■■□□□ 1.3
SNF8-213ENST00000514929 GPSM1Q86YR5 675 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 NT5CQ8TCD5 201 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 SLC29A3Q9BZD2 475 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 WWOXQ9NZC7 414 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 C19orf25Q9UFG5 118 aaPredicted RBP23.15■■□□□ 1.3
SNF8-213ENST00000514929 CSAG2Q9Y5P2 127 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 SCN3AQ9NY46 2000 aa23.15■■□□□ 1.3
SNF8-213ENST00000514929 FLNCQ14315 2725 aa23.14■■□□□ 1.3
SNF8-213ENST00000514929 FAM155BO75949 473 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CYC1P08574 325 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CD1DP15813 335 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 ALOX12P18054 663 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 SLC6A12P48065 614 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 GLRBP48167 497 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 MFAP5Q13361 173 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 SLMAPQ14BN4 828 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 PCOLCEQ15113 449 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 ZKSCAN8Q15776 578 aaPredicted RBP23.14■■□□□ 1.29
SNF8-213ENST00000514929 DEFB134Q4QY38 66 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CRB2Q5IJ48 1285 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 RAPH1Q70E73 1250 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 ABHD13Q7L211 337 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CUZD1Q86UP6 607 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 SHISA5Q8N114 240 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 TCAIMQ8N3R3 496 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 AFAP1L2Q8N4X5 818 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CISD2Q8N5K1 135 aaKnown RBP23.14■■□□□ 1.29
SNF8-213ENST00000514929 TRPV3Q8NET8 790 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 DNAJB14Q8TBM8 379 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 SNRNP40Q96DI7 357 aaKnown RBP23.14■■□□□ 1.29
SNF8-213ENST00000514929 PEX11GQ96HA9 241 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 CYTH2Q99418 400 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 PTGFRNQ9P2B2 879 aa23.14■■□□□ 1.29
SNF8-213ENST00000514929 SETXQ7Z333 2677 aaKnown RBP23.14■■□□□ 1.29
SNF8-213ENST00000514929 RELNP78509 3460 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 GALR3O60755 368 aaPredicted RBP23.13■■□□□ 1.29
SNF8-213ENST00000514929 H2AFYO75367 372 aaKnown RBP23.13■■□□□ 1.29
SNF8-213ENST00000514929 WFS1O76024 890 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 ZNF888P0CJ79 500 aaPredicted RBP23.13■■□□□ 1.29
SNF8-213ENST00000514929 ICAM2P13598 275 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 AP2B1P63010 937 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 GUCY2DQ02846 1103 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 CDC16Q13042 620 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 NAB1Q13506 487 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 OR4D1Q15615 310 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 NIPAL1Q6NVV3 410 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 RIPOR1Q6ZS17 1223 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 LANCL3Q6ZV70 420 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 KLHDC8AQ8IYD2 350 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 ANKRD53Q8N9V6 530 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 BRIX1Q8TDN6 353 aaKnown RBP23.13■■□□□ 1.29
SNF8-213ENST00000514929 C19orf60Q96EN9 201 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 CNDP1Q96KN2 507 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 LMF1Q96S06 567 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 TUBB6Q9BUF5 446 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 RBCK1Q9BYM8 510 aa23.13■■□□□ 1.29
SNF8-213ENST00000514929 CNOT10Q9H9A5 744 aaKnown RBP23.13■■□□□ 1.29
SNF8-213ENST00000514929 URADA6NGE7 173 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 CELA2AP08217 269 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 C1GALT1C1LP0DN25 315 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 IL10P22301 178 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 HNF4AP41235 474 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 EFTUD2Q15029 972 aaKnown RBP eCLIP23.12■■□□□ 1.291e-7■□□□□ 10.6
SNF8-213ENST00000514929 CPEB2Q7Z5Q1 589 aaKnown RBP23.12■■□□□ 1.29
SNF8-213ENST00000514929 FAM26EQ8N5C1 309 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 SIRT6Q8N6T7 355 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 OR5T3Q8NGG3 340 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 UBXN10Q96LJ8 280 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 OR1F2PQ96R84 312 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 CAPS2Q9BXY5 557 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 ZDHHC18Q9NUE0 388 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 ASF1BQ9NVP2 202 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 CD274Q9NZQ7 290 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 RNF112Q9ULX5 631 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 PCDHGA10Q9Y5H3 936 aa23.12■■□□□ 1.29
SNF8-213ENST00000514929 COPG1Q9Y678 874 aaKnown RBP23.12■■□□□ 1.29
SNF8-213ENST00000514929 IGHV3-20A0A0C4DH32 117 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 CTAGE15A4D2H0 777 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 OR2W5A6NFC9 320 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 TAPBPO15533 448 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 CDC123O75794 336 aaPredicted RBP23.11■■□□□ 1.29
SNF8-213ENST00000514929 SEC24DO94855 1032 aaPredicted RBP23.11■■□□□ 1.29
SNF8-213ENST00000514929 B3GALT4O96024 378 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 S100BP04271 92 aaPredicted RBP23.11■■□□□ 1.29
SNF8-213ENST00000514929 AGTR2P50052 363 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 RAB8AP61006 207 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 OLR1P78380 273 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 CDKL4Q5MAI5 379 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms