RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 HES7Q9BYE0 225 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 LANCL2Q9NS86 450 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ANKRD10Q9NXR5 420 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 ARL15Q9NXU5 204 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC22A7Q9Y694 548 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 CREBBPQ92793 2442 aa10.87□□□□□ -0.67
HMGCS1-204ENST00000507293 NCOA6Q14686 2063 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 NDUFS4O43181 175 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 OR1F1O43749 312 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 WISP2O76076 250 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 B3GALT4O96024 378 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 AHSGP02765 367 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 SERPIND1P05546 499 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 IL10P22301 178 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 GRNP28799 593 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 CA7P43166 264 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 CCR8P51685 355 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 IL2P60568 153 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 OLR1P78380 273 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 RBPJQ06330 500 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 ACTN3Q08043 901 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 USP10Q14694 798 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 HERC3Q15034 1050 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 NSDHLQ15738 373 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 MEP1AQ16819 746 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 BBS9Q3SYG4 887 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 HECTD2Q5U5R9 776 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 DUPD1Q68J44 220 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 KIAA0408Q6ZU52 694 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 IGDCC3Q8IVU1 814 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 AFAP1L2Q8N4X5 818 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF740Q8NDX6 193 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 ABHD11Q8NFV4 315 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 OR4K1Q8NGD4 311 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 FBXL8Q96CD0 374 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 SNF8Q96H20 258 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 LPAR4Q99677 370 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 UTP23Q9BRU9 249 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 NAT9Q9BTE0 207 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 UNKQ9C0B0 810 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 DDX47Q9H0S4 455 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 SPNS1Q9H2V7 528 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 MMP25Q9NPA2 562 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 KLHL1Q9NR64 748 aa10.86□□□□□ -0.67
HMGCS1-204ENST00000507293 GABRR3A8MPY1 467 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 MAGEB17A8MXT2 336 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 FAM227AF5H4B4 570 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TTI1O43156 1089 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CHST10O43529 356 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 DNAJB6O75190 326 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 GUCA1CO95843 209 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 FHP07954 510 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF888P0CJ79 500 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 ALOX12P18054 663 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CD96P40200 585 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 AP1S2P56377 157 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 OR4D2P58180 307 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC26A5P58743 744 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TAS2R50P59544 299 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 ART3Q13508 389 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 PWP1Q13610 501 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 NAA30Q147X3 362 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 OR1C1Q15619 314 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.673e-9■■□□□ 13.4
HMGCS1-204ENST00000507293 DEFB134Q4QY38 66 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 HP1BP3Q5SSJ5 553 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TEDDM1Q5T9Z0 273 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 FAM45BPQ6NSW5 357 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 GALNT7Q86SF2 657 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 MRGPRGQ86SM5 289 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF808Q8N4W9 903 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TBC1D19Q8N5T2 526 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC5A8Q8N695 610 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 NT5CQ8TCD5 201 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 FAM45AQ8TCE6 357 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 NEIL2Q969S2 332 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TBC1D20Q96BZ9 403 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CFAP36Q96G28 342 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 SCMH1Q96GD3 660 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 PWWP2AQ96N64 755 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TSNARE1Q96NA8 513 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 OLFM1Q99784 485 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 SARGQ9BW04 601 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TRIM54Q9BYV2 358 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 TSPAN10Q9H1Z9 355 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 PPANQ9NQ55 473 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 IKZF3Q9UKT9 509 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 SNX12Q9UMY4 172 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 PCDHGB6Q9Y5F9 930 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CENPEQ02224 2701 aa10.85□□□□□ -0.67
HMGCS1-204ENST00000507293 CES2O00748 559 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC19A2O60779 497 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 B4GALT2O60909 372 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms