RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TMEM52BQ4KMG9 183 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 LRRC73Q5JTD7 316 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 TMEM201Q5SNT2 666 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 FNBP1LQ5T0N5 605 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 DENND2CQ68D51 928 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 DPPA4Q7L190 304 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 NLRP9Q7RTR0 991 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 GLT6D1Q7Z4J2 308 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 PLXDC1Q8IUK5 500 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 MCATQ8IVS2 390 aaKnown RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 MRPL41Q8IXM3 137 aaKnown RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 PALM2Q8IXS6 379 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 ZBED8Q8IZ13 594 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 SFRP1Q8N474 314 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 TTC30BQ8N4P2 665 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 PLA2G15Q8NCC3 412 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 FBXO36Q8NEA4 188 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 BRSK1Q8TDC3 778 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 CXorf40AQ8TE69 158 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 PYROXD1Q8WU10 500 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 GCDHQ92947 438 aaPredicted RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 SIGLEC10Q96LC7 697 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 SMIM14Q96QK8 99 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 MCCC1Q96RQ3 725 aaPredicted RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 LMF1Q96S06 567 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 LYSMD1Q96S90 227 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 EBNA1BP2Q99848 306 aaKnown RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 NAT9Q9BTE0 207 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 TBC1D10AQ9BXI6 508 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 C1QTNF7Q9BXJ2 289 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 GSDMCQ9BYG8 508 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 IL22Q9GZX6 179 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 LHPPQ9H008 270 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 MRM3Q9HC36 420 aaKnown RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 SYBUQ9NX95 663 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
FXN-205ENST00000498653 B4GALT6Q9UBX8 382 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 NKX1-2Q9UD57 310 aaPredicted RBP4.91□□□□□ -1.62
FXN-205ENST00000498653 FBXL4Q9UKA2 621 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 RNF112Q9ULX5 631 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 CHMP2BQ9UQN3 213 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 COQ6Q9Y2Z9 468 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 ZNF711Q9Y462 761 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 TCAF1Q9Y4C2 921 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
FXN-205ENST00000498653 A0A096LNT2 108 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 UQCRHLA0A096LP55 91 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 LCE6AA0A183 80 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 RGSL1A5PLK6 1076 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 E7ESA3 106 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 NPIPA5E9PKD4 350 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 AGPSO00116 658 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PSMD11O00231 422 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 BUD23O43709 281 aaKnown RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 BANF1O75531 89 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 HTR3BO95264 441 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CLDN7O95471 211 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TTC4O95801 387 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 F10P00742 488 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PCCBP05166 539 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 POLBP06746 335 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 UQCRHP07919 91 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 GSTA2P09210 222 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 FAM153BP0C7A2 387 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ELFN1P0C7U0 828 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 MYBL2P10244 700 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PGAM1P18669 254 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PAMP19021 973 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 MMP12P39900 470 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 HADHAP40939 763 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 STC1P52823 247 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CASP9P55211 416 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CRADDP78560 199 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 RALGDSQ12967 914 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 MSLNQ13421 630 aaPredicted RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 NFATC2Q13469 925 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 MTM1Q13496 603 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 SLBPQ14493 270 aaKnown RBP eCLIP4.9□□□□□ -1.63
FXN-205ENST00000498653 BRD3Q15059 726 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PTPRRQ15256 657 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CNGA3Q16281 694 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CLEC12BQ2HXU8 276 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 FAM153CQ494X1 144 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CCDC38Q502W7 563 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 SPANXN3Q5MJ09 141 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TSTD2Q5T7W7 516 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ZDHHC20Q5W0Z9 365 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 LRRC66Q68CR7 880 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TMEM211Q6ICI0 200 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 CYB5D1Q6P9G0 228 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 EMBQ6PCB8 327 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 LIPIQ6XZB0 460 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TMC3Q7Z5M5 1100 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TSPAN33Q86UF1 283 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ZDHHC13Q8IUH4 622 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 GSPT2Q8IYD1 628 aaKnown RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 SYTL1Q8IYJ3 562 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 GHDCQ8N2G8 530 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 MPP5Q8N3R9 675 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms