RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 AIF1LQ9BQI0 150 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 TMEM79Q9BSE2 394 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 CAPS2Q9BXY5 557 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 SLC6A16Q9GZN6 736 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 VN1R1Q9GZP7 353 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 MKL2Q9ULH7 1088 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 NAALAD2Q9Y3Q0 740 aa16.34■□□□□ 0.21
CTNS-207ENST00000495445 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.21
CTNS-207ENST00000495445 CLEC18AA5D8T8 446 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 KIF2AO00139 706 aaPredicted RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 NDUFS4O43181 175 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 GALR3O60755 368 aaPredicted RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 DNAJB6O75190 326 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 JRKO75564 520 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 KLHL18O94889 574 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 ALOX12P18054 663 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 GNAZP19086 355 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 IL10P22301 178 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 CXCR2P25025 360 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 VARSP26640 1264 aaKnown RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 GMPRP36959 345 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 XCR1P46094 333 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 EFTUD2Q15029 972 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTNS-207ENST00000495445 PCOLCEQ15113 449 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 AGAP7PQ5VUJ5 663 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 CLEC18BQ6UXF7 455 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 FRA10AC1Q70Z53 315 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 CLEC18CQ8NCF0 446 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 PDPRQ8NCN5 879 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 PLPP5Q8NEB5 264 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 MNS1Q8NEH6 495 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 ZCCHC10Q8TBK6 192 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 UTP15Q8TED0 518 aaKnown RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 THOC3Q96J01 351 aaKnown RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 AGAP4Q96P64 663 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 LMF1Q96S06 567 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 AICDAQ9GZX7 198 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 NT5DC2Q9H857 520 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 CLK4Q9HAZ1 481 aaKnown RBP16.33■□□□□ 0.2
CTNS-207ENST00000495445 ZNF160Q9HCG1 818 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 IGSF5Q9NSI5 407 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 NINJ2Q9NZG7 142 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 GPRC5BQ9NZH0 403 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 B3GNT3Q9Y2A9 372 aa16.33■□□□□ 0.2
CTNS-207ENST00000495445 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 NSG1A0A0A6YYJ2 146 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 NCF1BA6NI72 391 aaPredicted RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 NCF1CA8MVU1 366 aaPredicted RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 PRAMEF4O60810 478 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 WDR47O94967 919 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 SERPINA6P08185 405 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 PRR35P0CG20 571 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 NCF1P14598 390 aaPredicted RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 ECHS1P30084 290 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 RGS1Q08116 209 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 CDC16Q13042 620 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 INPP5JQ15735 1006 aaPredicted RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 UBAP2Q5T6F2 1119 aaKnown RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 PRAMEF9Q5VWM5 478 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 CEP128Q6ZU80 1094 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 CCDC91Q7Z6B0 441 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 CMC1Q7Z7K0 106 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 TMPRSS11BQ86T26 416 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 KBTBD2Q8IY47 623 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 ZADH2Q8N4Q0 377 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 STAG3L4Q8TBR4 150 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 TM9SF4Q92544 642 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 WDR34Q96EX3 536 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 PITHD1Q9GZP4 211 aaPredicted RBP16.32■□□□□ 0.2
CTNS-207ENST00000495445 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 EHD1Q9H4M9 534 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 NMRAL1Q9HBL8 299 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 LANCL2Q9NS86 450 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 HCN3Q9P1Z3 774 aa16.32■□□□□ 0.2
CTNS-207ENST00000495445 H2AFYO75367 372 aaKnown RBP16.31■□□□□ 0.2
CTNS-207ENST00000495445 RDH16O75452 317 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 STK16O75716 305 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 SERPINA7P05543 415 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 C8orf89P0DMQ9 161 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 SOX11P35716 441 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
CTNS-207ENST00000495445 PCDH1Q08174 1060 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 E2F2Q14209 437 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 RBBP5Q15291 538 aaKnown RBP16.31■□□□□ 0.2
CTNS-207ENST00000495445 FAAH2Q6GMR7 532 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 RIPOR1Q6ZS17 1223 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 GALNT11Q8NCW6 608 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 OR5T3Q8NGG3 340 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 SEC16BQ96JE7 1060 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 OR1F2PQ96R84 312 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 ATOH8Q96SQ7 321 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 BARD1Q99728 777 aaKnown RBP16.31■□□□□ 0.2
CTNS-207ENST00000495445 KLHL31Q9H511 634 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
CTNS-207ENST00000495445 CNOT10Q9H9A5 744 aaKnown RBP16.31■□□□□ 0.2
CTNS-207ENST00000495445 SLAMF7Q9NQ25 335 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms