RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 VIMP08670 466 aaKnown RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 SPP1P10451 314 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 IFNAR1P17181 557 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SFTPDP35247 375 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 NAGLUP54802 743 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 GUCY2DQ02846 1103 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SULT2A1Q06520 285 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SGCGQ13326 291 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TNK1Q13470 666 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 RFTN1Q14699 578 aaPredicted RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 PTPN14Q15678 1187 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 ZNF74Q16587 644 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 GPR33Q49SQ1 333 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 EIPR1Q53HC9 387 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SPOUT1Q5T280 376 aaKnown RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 FHL5Q5TD97 284 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 FAM91A1Q658Y4 838 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TRAT1Q6PIZ9 186 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 PET117Q6UWS5 81 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TMEM64Q6YI46 380 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 ZNF841Q6ZN19 808 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 FAM47EQ6ZV65 393 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 IL17RELQ6ZVW7 336 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 CEACAM19Q7Z692 300 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TIGD4Q8IY51 512 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 RCOR2Q8IZ40 523 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 PARP8Q8N3A8 854 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 CCDC63Q8NA47 563 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TYMSOSQ8TAI1 123 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SLC26A7Q8TE54 656 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 HEXDCQ8WVB3 486 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SEPT1Q8WYJ6 367 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 PIK3R3Q92569 461 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 PYCR2Q96C36 320 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 ZNF486Q96H40 463 aaPredicted RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 NYXQ9GZU5 481 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 RIMS4Q9H426 269 aaPredicted RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 RNF121Q9H920 327 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 CHCHD3Q9NX63 227 aaKnown RBP2.95□□□□□ -1.94
VPS50-219ENST00000495039 CTSZQ9UBR2 303 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 KIF25-AS1Q9Y6Z4 181 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 A0A087WUV0 522 aaPredicted RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 TRAV34A0A0B4J273 112 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 C2CD4DB7Z1M9 353 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PI4K2BG5E9Z4 385 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 TEX28O15482 410 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PRAF2O60831 178 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PGLSO95336 258 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 RPN1P04843 607 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 ATP1B1P05026 303 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 RPL35AP18077 110 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 CAPGP40121 348 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PRKCIP41743 596 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 TSFMP43897 325 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 LYZP61626 148 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 TRIM29Q14134 588 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 KHDRBS2Q5VWX1 349 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 SHEQ5VZ18 495 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 CAVIN1Q6NZI2 390 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 SHQ1Q6PI26 577 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 SPATA19Q7Z5L4 167 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PHLDB2Q86SQ0 1253 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 DZIP1Q86YF9 867 aaKnown RBP2.94□□□□□ -1.94
VPS50-219ENST00000495039 METTL4Q8N3J2 472 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 FAM89BQ8N5H3 189 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 OCC1Q8TAD7 63 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 ATP8B4Q8TF62 1192 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 GATAD1Q8WUU5 269 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 DEPDC1BQ8WUY9 529 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 RAD54LQ92698 747 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 KLHL5Q96PQ7 755 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 BTBD9Q96Q07 612 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PSMB7Q99436 277 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 NDNQ99608 321 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 ZNF577Q9BSK1 485 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 INPP5KQ9BT40 448 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 PRDM4Q9UKN5 801 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 CSNK1G3Q9Y6M4 447 aa2.94□□□□□ -1.94
VPS50-219ENST00000495039 HEG1Q9ULI3 1381 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 LOC105371242A0A075B767 164 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 A0A1W2PR80 420 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 C17orf105B2RV13 164 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 FAM86B1E9PN63 330 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 CCL24O00175 119 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 HPP00738 406 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 FAM86B2P0C5J1 330 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 FAM58BPP0C7Q3 252 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 F3P13726 295 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 ADRA2CP18825 462 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 ELAVL4P26378 380 aaKnown RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 HLA-FP30511 346 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 CDX1P47902 265 aaPredicted RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 XGP55808 180 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 CSNK2BP67870 215 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 EFTUD2Q15029 972 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS50-219ENST00000495039 FGD3Q5JSP0 725 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 FUT10Q6P4F1 479 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms