RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MLYCDO95822 493 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 GABRB3P28472 473 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 CD96P40200 585 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 CCR8P51685 355 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 ACTN3Q08043 901 aaPredicted RBP21.87■■□□□ 1.09
COL27A1-208ENST00000494780 ABRAXAS2Q15018 415 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 OR1C1Q15619 314 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 DUPD1Q68J44 220 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 KIAA0408Q6ZU52 694 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 AFAP1L2Q8N4X5 818 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 SLC5A8Q8N695 610 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 OR4K1Q8NGD4 311 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 SCMH1Q96GD3 660 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 SIGLEC12Q96PQ1 595 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 NPAS2Q99743 824 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 LANCL2Q9NS86 450 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 CD46P15529 392 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 GRNP28799 593 aaKnown RBP21.86■■□□□ 1.09
COL27A1-208ENST00000494780 CDKN2DP55273 166 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 AP1S2P56377 157 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 SKP1P63208 163 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 PWP1Q13610 501 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 USP10Q14694 798 aaKnown RBP21.86■■□□□ 1.09
COL27A1-208ENST00000494780 SPANXN3Q5MJ09 141 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 RBM20Q5T481 1227 aaKnown RBP21.86■■□□□ 1.09
COL27A1-208ENST00000494780 NIPAL1Q6NVV3 410 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 CNTN4Q8IWV2 1026 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 LGI4Q8N135 537 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 TMEM178AQ8NBL3 297 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 OR56A3Q8NH54 315 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 THAP3Q8WTV1 239 aaPredicted RBP21.86■■□□□ 1.09
COL27A1-208ENST00000494780 NAT9Q9BTE0 207 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 RBCK1Q9BYM8 510 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 TRIM54Q9BYV2 358 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 CHST11Q9NPF2 352 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 ARL15Q9NXU5 204 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 SH3BGRL2Q9UJC5 107 aa21.86■■□□□ 1.09
COL27A1-208ENST00000494780 GOLGA6L10A0A0M3HER8 536 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ASPDHA6ND91 283 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 PABPN1LA6NDY0 278 aaKnown RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ZNF860A6NHJ4 632 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 CDK2AP1O14519 115 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 NDUFS4O43181 175 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 OR1F1O43749 312 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 GALR3O60755 368 aaPredicted RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 CDC123O75794 336 aaPredicted RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TSPAN12O95859 305 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 AHSGP02765 367 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 FHP07954 510 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 EEF1DP29692 281 aaKnown RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 OR4D2P58180 307 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TAS2R50P59544 299 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 IL2P60568 153 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ZNF630Q2M218 657 aaPredicted RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ZXDCQ2QGD7 858 aaPredicted RBP21.85■■□□□ 1.09
COL27A1-208ENST00000494780 KRTCAP3Q53RY4 240 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 STRA8Q7Z7C7 330 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 GALNT7Q86SF2 657 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TBC1D19Q8N5T2 526 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 HORMAD2Q8N7B1 307 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ZNF740Q8NDX6 193 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 OR5T3Q8NGG3 340 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ACTRT1Q8TDG2 376 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ATL1Q8WXF7 558 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TSLPQ969D9 159 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TBC1D20Q96BZ9 403 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 PYCR2Q96C36 320 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 SNF8Q96H20 258 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 GPR137Q96N19 417 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 KLHL1Q9NR64 748 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 ANKRD10Q9NXR5 420 aa21.85■■□□□ 1.09
COL27A1-208ENST00000494780 TRBC2A0A5B9 178 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 GABRR3A8MPY1 467 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 MAN1A2O60476 641 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 WISP2O76076 250 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 ALOX12P18054 663 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 JAK1P23458 1154 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 ELAVL4P26378 380 aaKnown RBP21.84■■□□□ 1.09
COL27A1-208ENST00000494780 HTR1EP28566 365 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 SLC26A5P58743 744 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 MEF2AQ02078 507 aaPredicted RBP21.84■■□□□ 1.09
COL27A1-208ENST00000494780 PDAP1Q13442 181 aaKnown RBP21.84■■□□□ 1.09
COL27A1-208ENST00000494780 PPP1R7Q15435 360 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 SPINK14Q6IE38 97 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 XKRXQ6PP77 449 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 HES7Q9BYE0 225 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 ZNF835Q9Y2P0 537 aa21.84■■□□□ 1.09
COL27A1-208ENST00000494780 FAM227AF5H4B4 570 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 PTGER4P35408 488 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 ALDH6A1Q02252 535 aaKnown RBP21.83■■□□□ 1.09
COL27A1-208ENST00000494780 C3AR1Q16581 482 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 DEFB134Q4QY38 66 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 FAM98AQ8NCA5 519 aaKnown RBP21.83■■□□□ 1.09
COL27A1-208ENST00000494780 NT5CQ8TCD5 201 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 ELP5Q8TE02 316 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 FBXL8Q96CD0 374 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 CERS2Q96G23 380 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 MAGED4Q96JG8 741 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 OR4K3Q96R72 315 aa21.83■■□□□ 1.09
COL27A1-208ENST00000494780 OSBPL9Q96SU4 736 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms