RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LOC102723996A0A087X1L8 192 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 DYTNA2CJ06 578 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 NPEPPSL1A6NEC2 478 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 NDUFS4O43181 175 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 WDPCPO95876 746 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SLC35G6P0C7Q6 338 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ICAM2P13598 275 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SSTR1P30872 391 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SOX11P35716 441 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 TSFMP43897 325 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 AP1S2P56377 157 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 RAB8AP61006 207 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ZNF33BQ06732 778 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ACTN3Q08043 901 aaPredicted RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 RBBP5Q15291 538 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 C18orf21Q32NC0 220 aaPredicted RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 FCRLBQ6BAA4 426 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SBSNQ6UWP8 590 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ANKRD37Q7Z713 158 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ZC3HC1Q86WB0 502 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 CEP97Q8IW35 865 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 C17orf53Q8N3J3 647 aaPredicted RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 SPATA6LQ8N4H0 392 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 OR4K1Q8NGD4 311 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 PYROXD1Q8WU10 500 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 FAR1Q8WVX9 515 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SLC5A11Q8WWX8 675 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 ATL1Q8WXF7 558 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 HAS2Q92819 552 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 NEIL2Q969S2 332 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 FBXL8Q96CD0 374 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 PDLIM5Q96HC4 596 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 PDLIM2Q96JY6 352 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 BARD1Q99728 777 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 EGFL8Q99944 293 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 TUBB6Q9BUF5 446 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SAYSD1Q9NPB0 183 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 SMYD2Q9NRG4 433 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 RIC8BQ9NVN3 520 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 MOCS1Q9NZB8 636 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 OSGIN2Q9Y236 505 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 MTO1Q9Y2Z2 717 aaKnown RBP9.06□□□□□ -0.96
MSH5-218ENST00000494646 DYRK1BQ9Y463 629 aa9.06□□□□□ -0.96
MSH5-218ENST00000494646 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 POLEQ07864 2286 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 TRBC2A0A5B9 178 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 NCF1BA6NI72 391 aaPredicted RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 NCF1CA8MVU1 366 aaPredicted RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 CXorf49A8MYA2 514 aaPredicted RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 E7ESA3 106 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 CHST10O43529 356 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 B4GALT2O60909 372 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 ENO2P09104 434 aaPredicted RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 NCF1P14598 390 aaPredicted RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 GDF5P43026 501 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 TNFSF10P50591 281 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 C2orf54Q08AI8 447 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 TSNQ15631 228 aaKnown RBP9.05□□□□□ -0.96
MSH5-218ENST00000494646 NSDHLQ15738 373 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 BTBD16Q32M84 506 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 DEFB134Q4QY38 66 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 FBXO48Q5FWF7 155 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 ST6GALNAC3Q8NDV1 305 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 PLPP5Q8NEB5 264 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 ABHD11Q8NFV4 315 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 TSLPQ969D9 159 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 C5orf34Q96MH7 638 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 TAAR6Q96RI8 345 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 ERP44Q9BS26 406 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 RHBGQ9H310 441 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 KLHL31Q9H511 634 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 CAB39LQ9H9S4 337 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 KCNK13Q9HB14 408 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 RNF14Q9UBS8 474 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 CTNNAL1Q9UBT7 734 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 GTF3C1Q12789 2109 aa9.05□□□□□ -0.96
MSH5-218ENST00000494646 CROCCQ5TZA2 2017 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 A8MUA0 341 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 LRRTM2O43300 516 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 RAD51CO43502 376 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 GALR3O60755 368 aaPredicted RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 DDAH2O95865 285 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ZNF888P0CJ79 500 aaPredicted RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 EDN3P14138 238 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ZNF37AP17032 561 aaPredicted RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 ALOX12P18054 663 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 CASQ1P31415 396 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SCTRP47872 440 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SLC12A2P55011 1212 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 BTG2P78543 158 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 RHAGQ02094 409 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms