RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CBX3Q13185 183 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ITGADQ13349 1161 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 C18orf21Q32NC0 220 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 ATP13A5Q4VNC0 1218 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 IFI44LQ53G44 452 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 XKR6Q5GH73 641 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 DUS1LQ6P1R4 473 aaKnown RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 GDPGP1Q6ZNW5 385 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PLEKHG7Q6ZR37 379 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ZNF621Q6ZSS3 439 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PHACTR4Q8IZ21 702 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ELMO1Q92556 727 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 TANKQ92844 425 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 TAMM41Q96BW9 452 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ZHX1-C8orf76Q96EF9 292 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 C11orf24Q96F05 449 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 ZNF764Q96H86 408 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 COL21A1Q96P44 957 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 SIGLEC11Q96RL6 698 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PITHD1Q9GZP4 211 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 FAM83DQ9H4H8 585 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 FARSBQ9NSD9 589 aaKnown RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 TBC1D14Q9P2M4 693 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 DKK3Q9UBP4 350 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 MKLN1Q9UL63 735 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ANGPT4Q9Y264 503 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PEX16Q9Y5Y5 336 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 SPTBN5Q9NRC6 3674 aaKnown RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 B4GAT1O43505 415 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 CNOT3O75175 753 aaKnown RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 SNX4O95219 450 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 MED26O95402 600 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 PTTG1O95997 202 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 RPLP0P05388 317 aaKnown RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 CD247P20963 164 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SOX11P35716 441 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 OPRL1P41146 370 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 PRLHRP49683 370 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 DAPP51397 102 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SMIM11AP58511 58 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 CDC42P60953 191 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 RPS3AP61247 264 aaKnown RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 SELENOWP63302 87 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 TFF2Q03403 129 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 PRKCDQ05655 676 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 HYAL1Q12794 435 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 ADAM15Q13444 863 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SPCS2Q15005 226 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 UGT8Q16880 541 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 EGFLAMQ63HQ2 1017 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 MED27Q6P2C8 311 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 GDPD4Q6W3E5 623 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 CHST15Q7LFX5 561 aaPredicted RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 ZNF367Q7RTV3 350 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 THOC6Q86W42 341 aaKnown RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 KRT73Q86Y46 540 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SLC44A2Q8IWA5 706 aaPredicted RBP11.07□□□□□ -0.64
RFC4-214ENST00000494047 LINC00471Q8N535 108 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 OR52N2Q8NGI0 321 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 OR56A3Q8NH54 315 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 Q96MT0 163 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 ALPK1Q96QP1 1244 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 TCF25Q9BQ70 676 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 AHSPQ9NZD4 102 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SELENONQ9NZV5 590 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SPASTQ9UBP0 616 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 GULP1Q9UBP9 304 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 OSGIN1Q9UJX0 560 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 SLC22A14Q9Y267 594 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 CFL2Q9Y281 166 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 DYRK1BQ9Y463 629 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 KLK4Q9Y5K2 254 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 IRAK3Q9Y616 596 aa11.07□□□□□ -0.64
RFC4-214ENST00000494047 TCF20Q9UGU0 1960 aaKnown RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 C1orf226A1L170 272 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CLCA1A8K7I4 914 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 NT5C1B-RDH14C9J2C7 533 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ADAM12O43184 909 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 SMAD6O43541 496 aaKnown RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 SCN2BO60939 215 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 SERPINB7O75635 380 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 INMTO95050 263 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PIPP12273 146 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 MYCLP1P12525 358 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 IRS1P35568 1242 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CTSKP43235 329 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CLK3P49761 638 aaKnown RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 ERVFC1P60507 584 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PFN3P60673 137 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PHC1P78364 1004 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PLIN5Q00G26 463 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 PTSQ03393 145 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 AQP6Q13520 282 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ATP1A4Q13733 1029 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 RGNQ15493 299 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms