RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZNF480Q8WV37 535 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 ANKRD49Q8WVL7 239 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 C10orf90Q96M02 699 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 OR2A5Q96R48 311 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 FMO2Q99518 471 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 RBBP8Q99708 897 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 TUBB6Q9BUF5 446 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 CDC42EP4Q9H3Q1 356 aaKnown RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 VIPAS39Q9H9C1 493 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 PARVBQ9HBI1 364 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 ZBTB20Q9HC78 741 aaPredicted RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 CCDC177Q9NQR7 707 aaPredicted RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 ABCF3Q9NUQ8 709 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 TMEM184CQ9NVA4 438 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 TXNDC16Q9P2K2 825 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 RUVBL1Q9Y265 456 aaKnown RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 KCNE1BA0A087WTH5 132 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 IGHV1-45A0A0A0MS14 117 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 A1L4Q6 167 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 CDC7O00311 574 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 NSA2O95478 260 aaKnown RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 C8GP07360 202 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 STSP08842 583 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 FAM153BP0C7A2 387 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 COX6A1P12074 109 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 SPRP35270 261 aaPredicted RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 SOX11P35716 441 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 GMPRP36959 345 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 GP5P40197 560 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 AGTR2P50052 363 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 TNFSF10P50591 281 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 SLC12A2P55011 1212 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 POU4F1Q01851 419 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 SP140Q13342 867 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 USP10Q14694 798 aaKnown RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 PHKG1Q16816 387 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 FAM153CQ494X1 144 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 VWA2Q5GFL6 755 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 ABHD17BQ5VST6 288 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 MBOAT1Q6ZNC8 495 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 LINC00696Q6ZRV3 163 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 LRRC56Q8IYG6 542 aaPredicted RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 PRSS58Q8IYP2 241 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 TBC1D19Q8N5T2 526 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 CAMKVQ8NCB2 501 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 OR1N1Q8NGS0 311 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 PDLIM5Q96HC4 596 aaKnown RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 CCDC138Q96M89 665 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 CYTH2Q99418 400 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 SLX1AQ9BQ83 275 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 FUT8Q9BYC5 575 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 PARD6BQ9BYG5 372 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 UNKQ9C0B0 810 aaKnown RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 ZNF700Q9H0M5 742 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 GPAMQ9HCL2 828 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 MED4Q9NPJ6 270 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
TTC28-207ENST00000490475 ABI3Q9P2A4 366 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.82□□□□□ -0.84
TTC28-207ENST00000490475 MKL2Q9ULH7 1088 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 SCN2AQ99250 2005 aa9.82□□□□□ -0.84
TTC28-207ENST00000490475 IGKV1-8A0A0C4DH67 115 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 SLC16A5O15375 505 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 NRP2O60462 931 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 ALOX12BO75342 701 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 JRKO75564 520 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 HIST1H2AGP0C0S8 130 aaPredicted RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 C8orf89P0DMQ9 161 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 ZNF37AP17032 561 aaPredicted RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 HIST1H2ADP20671 130 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 IMPA1P29218 277 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 PHBP35232 272 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 FOXL2P58012 376 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 RBPJQ06330 500 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 Q0VFX4 171 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 UAP1Q16222 522 aaPredicted RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 ZXDCQ2QGD7 858 aaPredicted RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 MROH9Q5TGP6 573 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 TMEM205Q6UW68 189 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 CEP128Q6ZU80 1094 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 C17orf64Q86WR6 236 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 LURAP1LQ8IV03 231 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 NKAPQ8N5F7 415 aaKnown RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 AMER3Q8N944 861 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 BRIX1Q8TDN6 353 aaKnown RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 NR4A3Q92570 626 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 HIST1H2AHQ96KK5 128 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 GPR22Q99680 433 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 HIST1H2AJQ99878 128 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 HAUS8Q9BT25 410 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 H2AFJQ9BTM1 129 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 TRIM54Q9BYV2 358 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.81□□□□□ -0.84
TTC28-207ENST00000490475 ATG10Q9H0Y0 220 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 PTGFRNQ9P2B2 879 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 STOX2Q9P2F5 926 aaPredicted RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 SUCOQ9UBS9 1254 aaKnown RBP9.81□□□□□ -0.84
TTC28-207ENST00000490475 OSGIN2Q9Y236 505 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 NTNG1Q9Y2I2 539 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms