RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 AGTR2P50052 363 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 Q0VFX4 171 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 MFAP5Q13361 173 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 UBAP2LQ14157 1087 aaKnown RBP16.5■□□□□ 0.23
SEC13-218ENST00000490283 TGFBIQ15582 683 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 TMEM205Q6UW68 189 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 ZDHHC24Q6UX98 284 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 LINC00696Q6ZRV3 163 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 SPATA6LQ8N4H0 392 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 FAM26EQ8N5C1 309 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 ZNF740Q8NDX6 193 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 TTLQ8NG68 377 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 NT5CQ8TCD5 201 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 FBF1Q8TES7 1133 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 RHBDF1Q96CC6 855 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 LMF1Q96S06 567 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 MESP1Q9BRJ9 268 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 UNKQ9C0B0 810 aaKnown RBP16.5■□□□□ 0.23
SEC13-218ENST00000490283 ZNF700Q9H0M5 742 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 ZBTB20Q9HC78 741 aaPredicted RBP16.5■□□□□ 0.23
SEC13-218ENST00000490283 LRRC4CQ9HCJ2 640 aa16.5■□□□□ 0.23
SEC13-218ENST00000490283 MTRF1LQ9UGC7 380 aaKnown RBP16.5■□□□□ 0.23
SEC13-218ENST00000490283 MDC1Q14676 2089 aaKnown RBP16.49■□□□□ 0.23
SEC13-218ENST00000490283 NBASA2RRP1 2371 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 DYTNA2CJ06 578 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 JRKO75564 520 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 GNLYP22749 145 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 JAK1P23458 1154 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 PHBP35232 272 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 CDC16Q13042 620 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 TLR1Q15399 786 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 DEFB134Q4QY38 66 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 PRR30Q53SZ7 412 aaPredicted RBP16.49■□□□□ 0.23
SEC13-218ENST00000490283 CDKL4Q5MAI5 379 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 SULT1C3Q6IMI6 304 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 IGFL2Q6UWQ7 119 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 TBC1D1Q86TI0 1168 aaPredicted RBP16.49■□□□□ 0.23
SEC13-218ENST00000490283 KRT78Q8N1N4 520 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 CISD2Q8N5K1 135 aaKnown RBP16.49■□□□□ 0.23
SEC13-218ENST00000490283 MNS1Q8NEH6 495 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 PEX11GQ96HA9 241 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 OR1F2PQ96R84 312 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 CYTH2Q99418 400 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 LRRC1Q9BTT6 524 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 AGPAT4Q9NRZ5 378 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 GPRC5BQ9NZH0 403 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 CD274Q9NZQ7 290 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 PTGFRNQ9P2B2 879 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 TEKT2Q9UIF3 430 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 RNF112Q9ULX5 631 aa16.49■□□□□ 0.23
SEC13-218ENST00000490283 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
SEC13-218ENST00000490283 NUP210LQ5VU65 1888 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 ZNF860A6NHJ4 632 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 CLGNO14967 610 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 GALR3O60755 368 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 ZNF888P0CJ79 500 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 C1GALT1C1LP0DN25 315 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 CD1DP15813 335 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 CRABP2P29373 138 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 HPDP32754 393 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 GDF5P43026 501 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 SLC6A12P48065 614 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 ARG2P78540 354 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 GUCY2DQ02846 1103 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 ZNF169Q14929 603 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 PCOLCEQ15113 449 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 TRADDQ15628 312 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 ZKSCAN8Q15776 578 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 B3GNTL1Q67FW5 361 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 CPEB2Q7Z5Q1 589 aaKnown RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 PDSS2Q86YH6 399 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 KLHDC8AQ8IYD2 350 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 AFAP1L2Q8N4X5 818 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 BRIX1Q8TDN6 353 aaKnown RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 SNRNP40Q96DI7 357 aaKnown RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 MOCOSQ96EN8 888 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 TSPYL1Q9H0U9 437 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 SPNS1Q9H2V7 528 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 PRM3Q9NNZ6 103 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 PCDHGA10Q9Y5H3 936 aa16.48■□□□□ 0.23
SEC13-218ENST00000490283 UBR5O95071 2799 aaPredicted RBP16.48■□□□□ 0.23
SEC13-218ENST00000490283 PSMD12O00232 456 aaPredicted RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 STK16O75716 305 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 WISP3O95389 354 aaPredicted RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 TUBB4AP04350 444 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 SERPINA6P08185 405 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 GSTM2P28161 218 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 HNF4AP41235 474 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 UQCRFS1P47985 274 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 STXBP1P61764 594 aaKnown RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 SNRPNP63162 240 aaKnown RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 ELOAQ14241 798 aaKnown RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 NSDHLQ15738 373 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 FHL5Q5TD97 284 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 CUZD1Q86UP6 607 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 SIRT6Q8N6T7 355 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms