RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PPP4R1Q8TF05 950 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 WDR77Q9BQA1 342 aaPredicted RBP18.68■□□□□ 0.58
SMC4-222ENST00000490207 TMEM79Q9BSE2 394 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 VN1R1Q9GZP7 353 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 EPS8L2Q9H6S3 715 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 MAP10Q9P2G4 905 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 CPAMD8Q8IZJ3 1885 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 ASH1LQ9NR48 2969 aaKnown RBP18.68■□□□□ 0.58
SMC4-222ENST00000490207 NBASA2RRP1 2371 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 VPS4BO75351 444 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 ALOX12P18054 663 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 GDF5P43026 501 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 SKP1P63208 163 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 PCOLCEQ15113 449 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 OR4D1Q15615 310 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 PLEKHN1Q494U1 663 aaPredicted RBP18.67■□□□□ 0.58
SMC4-222ENST00000490207 IGFL2Q6UWQ7 119 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 RAPH1Q70E73 1250 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 GPSM1Q86YR5 675 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 IQCKQ8N0W5 287 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 SHISA5Q8N114 240 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 ANKRD53Q8N9V6 530 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 ZNF700Q9H0M5 742 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 VPS4AQ9UN37 437 aa18.67■□□□□ 0.58
SMC4-222ENST00000490207 GALR3O60755 368 aaPredicted RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 PRR35P0CG20 571 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 ZNF888P0CJ79 500 aaPredicted RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 GNAZP19086 355 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 VARSP26640 1264 aaKnown RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 CDC16Q13042 620 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 RBBP5Q15291 538 aaKnown RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 NIPAL1Q6NVV3 410 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 ISLR2Q6UXK2 745 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 Q6ZS92 163 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 ABHD13Q7L211 337 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 MMGT1Q8N4V1 131 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 GALNT11Q8NCW6 608 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 TRPV3Q8NET8 790 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 EXT2Q93063 718 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 UBXN10Q96LJ8 280 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 RBCK1Q9BYM8 510 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 CNOT10Q9H9A5 744 aaKnown RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 C19orf25Q9UFG5 118 aaPredicted RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 MTRF1LQ9UGC7 380 aaKnown RBP18.66■□□□□ 0.58
SMC4-222ENST00000490207 RNF112Q9ULX5 631 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 CSAG2Q9Y5P2 127 aa18.66■□□□□ 0.58
SMC4-222ENST00000490207 RELNP78509 3460 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CTAGE15A4D2H0 777 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 URADA6NGE7 173 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 TAPBPO15533 448 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 S100BP04271 92 aaPredicted RBP18.65■□□□□ 0.58
SMC4-222ENST00000490207 SERPINA7P05543 415 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 UQCRHP07919 91 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CELA2AP08217 269 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SLC35E2BP0CK96 405 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 GMPRP36959 345 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 UQCRFS1P47985 274 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 MFAP5Q13361 173 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SLBPQ14493 270 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMC4-222ENST00000490207 DEFB134Q4QY38 66 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CRB2Q5IJ48 1285 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CDKL4Q5MAI5 379 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SULT1C3Q6IMI6 304 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 LINC00696Q6ZRV3 163 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CEP128Q6ZU80 1094 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 LANCL3Q6ZV70 420 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CTAGE6Q86UF2 777 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CUZD1Q86UP6 607 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMC4-222ENST00000490207 NOA1Q8NC60 698 aaKnown RBP18.65■□□□□ 0.58
SMC4-222ENST00000490207 PDPRQ8NCN5 879 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 MNS1Q8NEH6 495 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 OR5T3Q8NGG3 340 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 BRIX1Q8TDN6 353 aaKnown RBP18.65■□□□□ 0.58
SMC4-222ENST00000490207 KIAA1191Q96A73 305 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 PEX11GQ96HA9 241 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CNDP1Q96KN2 507 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 OR1F2PQ96R84 312 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SLC29A3Q9BZD2 475 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 SLC6A16Q9GZN6 736 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 DNAJC11Q9NVH1 559 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 GPRC5BQ9NZH0 403 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CD274Q9NZQ7 290 aa18.65■□□□□ 0.58
SMC4-222ENST00000490207 CDC123O75794 336 aaPredicted RBP18.64■□□□□ 0.57
SMC4-222ENST00000490207 B3GALT4O96024 378 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 C1GALT1C1LP0DN25 315 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 IL10P22301 178 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 GNLYP22749 145 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 CRABP2P29373 138 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 PHBP35232 272 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 SOX11P35716 441 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 GGT5P36269 586 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 HSPA7P48741 367 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 AP2B1P63010 937 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 OLR1P78380 273 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 FBXO48Q5FWF7 155 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 SLCO4C1Q6ZQN7 724 aa18.64■□□□□ 0.57
SMC4-222ENST00000490207 RIPOR1Q6ZS17 1223 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms