RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 IFFO1Q0D2I5 559 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 SLMAPQ14BN4 828 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 SIX1Q15475 284 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 C2CD6Q53TS8 623 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF648Q5T619 568 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 WLSQ5T9L3 541 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 MANEALQ5VSG8 457 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 RUSC1-AS1Q66K80 236 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 LRRC66Q68CR7 880 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 DUPD1Q68J44 220 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PLAG1Q6DJT9 500 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 DENND1BQ6P3S1 775 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 DNAJC14Q6Y2X3 702 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF704Q6ZNC4 412 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 TRILQ7L0X0 811 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 POLNQ7Z5Q5 900 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ADGRE4PQ86SQ3 457 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEM110Q86TL2 294 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 LRRTM4Q86VH4 590 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 NIPA2Q8N8Q9 360 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PRELID2Q8N945 189 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 UBLCP1Q8WVY7 318 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 SCRN2Q96FV2 425 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ZFYVE21Q9BQ24 234 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 OSBPL8Q9BZF1 889 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 EPB41L4BQ9H329 900 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 LRRC19Q9H756 370 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PDFQ9HBH1 243 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ASNSD1Q9NWL6 643 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 KLHL28Q9NXS3 571 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 UBA2Q9UBT2 640 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF282Q9UDV7 671 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ASIC3Q9UHC3 531 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 GDF2Q9UK05 429 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 WASH4PA8MWX3 477 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 HMGB1P1B2RPK0 211 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 SCAMP2O15127 329 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 SSX4O60224 188 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 GRAP2O75791 330 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CPP00450 1065 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 SOD3P08294 240 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM153BP0C7A2 387 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 TFE3P19532 575 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 USF1P22415 310 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 GCH1P30793 250 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CYB561P49447 251 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 AGFG1P52594 562 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 PLTPP55058 493 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 ADARP55265 1226 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 DSCR9P59020 149 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 DHX9Q08211 1270 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 AP1B1Q10567 949 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CCNG2Q16589 344 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 BTBD16Q32M84 506 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM153CQ494X1 144 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 LINC01559Q495D7 138 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 AADACL2Q6P093 401 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 LYPD8Q6UX82 237 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 GSTA5Q7RTV2 222 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 TMC3Q7Z5M5 1100 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 HOOK3Q86VS8 718 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 METTL27Q8N6F8 245 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 ARFGAP2Q8N6H7 521 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CCDC89Q8N998 374 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 TSEN2Q8NCE0 465 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 OR4E2Q8NGC2 313 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 STK32AQ8WU08 396 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 GTPBP3Q969Y2 492 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 SARAFQ96BY9 339 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 SNF8Q96H20 258 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 HS6ST2Q96MM7 605 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 ZIM3Q96PE6 472 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 FRMD8P1Q9BZ68 369 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 STMN4Q9H169 189 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 KCNK13Q9HB14 408 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CUTCQ9NTM9 273 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 IMP3Q9NV31 184 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 IL1RAPL1Q9NZN1 696 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 WHRNQ9P202 907 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM153AQ9UHL3 310 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 LIPT1Q9Y234 373 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 PCDHGB3Q9Y5G1 929 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 WIF1Q9Y5W5 379 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 CFAP20Q9Y6A4 193 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 MAU2Q9Y6X3 613 aa6.93□□□□□ -1.3
EXOSC3-206ENST00000489414 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 LRRD1A4D1F6 860 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 POM121CA8CG34 1229 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 BTN3A3O00478 584 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 BTN3A1O00481 513 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 SYF2O95926 243 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 IL18BPO95998 194 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 IL2RAP01589 272 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PTPN7P35236 360 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 OPRM1P35372 400 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms