RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SEC24DO94855 1032 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-213ENST00000489045 SERPIND1P05546 499 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 ELOAQ14241 798 aaKnown RBP21.72■■□□□ 1.07
COL9A3-213ENST00000489045 HERC3Q15034 1050 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 MAATS1Q7Z4T9 603 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 CPEB2Q7Z5Q1 589 aaKnown RBP21.72■■□□□ 1.07
COL9A3-213ENST00000489045 THOC6Q86W42 341 aaKnown RBP21.72■■□□□ 1.07
COL9A3-213ENST00000489045 GRHL3Q8TE85 626 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 EGFL8Q99944 293 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 RBCK1Q9BYM8 510 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 C19orf25Q9UFG5 118 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-213ENST00000489045 DYRK1BQ9Y463 629 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 OARD1Q9Y530 152 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 SVILO95425 2214 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 DYTNA2CJ06 578 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 ICAM2P13598 275 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 SSTR1P30872 391 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 SCTRP47872 440 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 AP2B1P63010 937 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 CDKL1Q00532 357 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 REEP5Q00765 189 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 PWP1Q13610 501 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 TSNQ15631 228 aaKnown RBP21.71■■□□□ 1.07
COL9A3-213ENST00000489045 TMPRSS11BQ86T26 416 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 C17orf53Q8N3J3 647 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-213ENST00000489045 AFAP1L2Q8N4X5 818 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 OR5T3Q8NGG3 340 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 OR1N1Q8NGS0 311 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 PEX11GQ96HA9 241 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 PELI2Q9HAT8 420 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 POPDC3Q9HBV1 291 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 GPAMQ9HCL2 828 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 GRHL1Q9NZI5 618 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 CTNNAL1Q9UBT7 734 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 SLC22A14Q9Y267 594 aa21.71■■□□□ 1.07
COL9A3-213ENST00000489045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL9A3-213ENST00000489045 CXorf49A8MYA2 514 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-213ENST00000489045 F10P00742 488 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ALOX12P18054 663 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 RGS1Q08116 209 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 FRA10AC1Q70Z53 315 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ANKRD37Q7Z713 158 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ADAMTSL2Q86TH1 951 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ST6GALNAC3Q8NDV1 305 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 NT5CQ8TCD5 201 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 CAB39LQ9H9S4 337 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ZFP69BQ9UJL9 534 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 MTO1Q9Y2Z2 717 aaKnown RBP21.7■■□□□ 1.06
COL9A3-213ENST00000489045 DOPEY1Q5JWR5 2465 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 ZGRF1Q86YA3 2104 aa21.7■■□□□ 1.06
COL9A3-213ENST00000489045 E2F3O00716 465 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 EIF3HO15372 352 aaKnown RBP eCLIP21.69■■□□□ 1.061e-9■□□□□ 10.4
COL9A3-213ENST00000489045 GALR3O60755 368 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-213ENST00000489045 CDC123O75794 336 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-213ENST00000489045 B3GALT4O96024 378 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 ZNF888P0CJ79 500 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-213ENST00000489045 CASQ1P31415 396 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 AHRP35869 848 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 AGTR2P50052 363 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 TNFSF10P50591 281 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 SLC12A2P55011 1212 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 BTBD16Q32M84 506 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 DEFB134Q4QY38 66 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 NXPE4Q6UWF7 544 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 ANKRD53Q8N9V6 530 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 FAR1Q8WVX9 515 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 CDKL2Q92772 493 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 HAS2Q92819 552 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 OR1F2PQ96R84 312 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 AIF1LQ9BQI0 150 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 UNKQ9C0B0 810 aaKnown RBP21.69■■□□□ 1.06
COL9A3-213ENST00000489045 LANCL2Q9NS86 450 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 ERRFI1Q9UJM3 462 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-213ENST00000489045 KCNE2Q9Y6J6 123 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 POLEQ07864 2286 aa21.69■■□□□ 1.06
COL9A3-213ENST00000489045 CTAGE15A4D2H0 777 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 WISP3O95389 354 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-213ENST00000489045 IL10P22301 178 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 HNMTP50135 292 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 OLR1P78380 273 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 POU4F1Q01851 419 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 RHAGQ02094 409 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 ILF2Q12905 390 aaKnown RBP21.68■■□□□ 1.06
COL9A3-213ENST00000489045 C18orf21Q32NC0 220 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-213ENST00000489045 PLAG1Q6DJT9 500 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 RPUSD3Q6P087 351 aaKnown RBP21.68■■□□□ 1.06
COL9A3-213ENST00000489045 FAM180AQ6UWF9 173 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 ABHD13Q7L211 337 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 CTAGE6Q86UF2 777 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 TXNDC16Q9P2K2 825 aa21.68■■□□□ 1.06
COL9A3-213ENST00000489045 PLEKHB1Q9UF11 243 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-213ENST00000489045 TRAV17A0A0B4J275 112 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 TCRBV9S1A1TA0A576 114 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 DNAJB6O75190 326 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 WDR47O94967 919 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 DDAH2O95865 285 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 WDPCPO95876 746 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 SKP1P63208 163 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 ZNF33BQ06732 778 aa21.67■■□□□ 1.06
COL9A3-213ENST00000489045 ABRAXAS2Q15018 415 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms