RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 PDK4Q16654 411 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 PAGE2BQ5JRK9 111 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 SLCO4C1Q6ZQN7 724 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 LRRC70Q7Z2Q7 622 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 AMER3Q8N944 861 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 ZNF740Q8NDX6 193 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 FDCSPQ8NFU4 85 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 METTL21AQ8WXB1 218 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 CCT6BQ92526 530 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 CD244Q9BZW8 370 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 IGSF5Q9NSI5 407 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 MKL2Q9ULH7 1088 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 MRPS2Q9Y399 296 aaKnown RBP13.54□□□□□ -0.24
BRCA1-218ENST00000489037 NAALAD2Q9Y3Q0 740 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 ANGPTL3Q9Y5C1 460 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 HS3ST3B1Q9Y662 390 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 ZNF462Q96JM2 2506 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 KALRNO60229 2985 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 J3QKU1 62 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 SGK494L7N484 410 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 UBXN8O00124 270 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 SOCS6O14544 535 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 DPM1O60762 260 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 KLHL18O94889 574 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 ABHD2P08910 425 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 GFAPP14136 432 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 ALOX12P18054 663 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 NR1D1P20393 614 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 IL10P22301 178 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 VARSP26640 1264 aaKnown RBP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 GLRBP48167 497 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 STXBP1P61764 594 aaKnown RBP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 MAT1AQ00266 395 aaKnown RBP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 IRF8Q02556 426 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 SLBPQ14493 270 aaKnown RBP eCLIP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 MYBPC3Q14896 1274 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 SYT16Q17RD7 645 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 MINDY4Q4G0A6 757 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 FBXO48Q5FWF7 155 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 XKR6Q5GH73 641 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 VWA5B1Q5TIE3 1220 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 TMIGD1Q6UXZ0 262 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 TM9SF4Q92544 642 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 PTCD3Q96EY7 689 aaKnown RBP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 ATOH8Q96SQ7 321 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 CCDC77Q9BR77 488 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 EFCAB11Q9BUY7 163 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 EHD1Q9H4M9 534 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 C5AR2Q9P296 337 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 OPTCQ9UBM4 332 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 C19orf25Q9UFG5 118 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-218ENST00000489037 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
BRCA1-218ENST00000489037 NSG1A0A0A6YYJ2 146 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 HMX2A2RU54 273 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 K7EPI3 171 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 RDH16O75452 317 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 BMP10O95393 424 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 HPP00738 406 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 ALDOAP04075 364 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 SERPINA6P08185 405 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 CYC1P08574 325 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 SNRPAP09012 282 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 RBP1P09455 135 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 GMPRP36959 345 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 HNF4AP41235 474 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 XCR1P46094 333 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 KCNC1P48547 511 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 AP2B1P63010 937 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 IRF9Q00978 393 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 RAPSNQ13702 412 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 TSNAXIP1Q2TAA8 658 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 TOR1AIP1Q5JTV8 583 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 UBAP2Q5T6F2 1119 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 FAAH2Q6GMR7 532 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 PRSS41Q7RTY9 318 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 LAPTM4BQ86VI4 370 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 ZC3H7AQ8IWR0 971 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 CENPLQ8N0S6 344 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 UBE2E3Q969T4 207 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 ESAMQ96AP7 390 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 MOCOSQ96EN8 888 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 FAR2Q96K12 515 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 SCYL1Q96KG9 808 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms