RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 KLHL1Q9NR64 748 aa10.67□□□□□ -0.7
HDAC6-228ENST00000486227 ADAMDEC1O15204 470 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ERI3O43414 337 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CPN2P22792 545 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 RPL4P36578 427 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TUBA1BP68363 451 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PRR5P85299 388 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 RPL6Q02878 288 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SP140Q13342 867 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PHF19Q5T6S3 580 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 FOXB2Q5VYV0 432 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 FAM131AQ6UXB0 335 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TUBA1AQ71U36 451 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TRAM1L1Q8N609 369 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 FUBP1Q96AE4 644 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PTERQ96BW5 349 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PRRG4Q9BZD6 226 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 FZD4Q9ULV1 537 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ERVK-11Q9UQG0 969 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PMF1-BGLAPU3KQ54 211 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SMCHD1A6NHR9 2005 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 KMOO15229 486 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 OPN1SWP03999 348 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 BMP2P12643 396 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PTX3P26022 381 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CPOXP36551 454 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CTSOP43234 321 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CDKL1Q00532 357 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 NADSYN1Q6IA69 706 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 MDGA1Q8NFP4 955 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 EFHD2Q96C19 240 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF597Q96LX8 424 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CTPS2Q9NRF8 586 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 OARD1Q9Y530 152 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 A0A1W2PP55 124 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 LAMP2P13473 410 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 AGXTP21549 392 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ARSFP54793 590 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 MS4A2Q01362 244 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TMPRSS11AQ6ZMR5 421 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SLC5A11Q8WWX8 675 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PIGKQ92643 395 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TCEAL4Q96EI5 215 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 FAM83CQ9BQN1 747 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SLC35A5Q9BS91 424 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 MEAF6Q9HAF1 191 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ARNT2Q9HBZ2 717 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TREX1Q9NSU2 369 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 CCDC59Q9P031 241 aaKnown RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ANKRD12Q6UB98 2062 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 COL24A1Q17RW2 1714 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ISPDA4D126 451 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 H3BMQ9 156 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 TNFRSF10BO14763 440 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 GABBR2O75899 941 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 IL7RP16871 459 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 C18orf21Q32NC0 220 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 DCST1Q5T197 706 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ANKRD26P1Q6NSI1 321 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF730Q6ZMV8 503 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 DCUN1D3Q8IWE4 304 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SAMD14Q8IZD0 417 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SLC15A4Q8N697 577 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 DNASE1L2Q92874 299 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SLC35G5Q96KT7 338 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 DMRTB1Q96MA1 342 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 COG8Q96MW5 612 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 EMCNQ9ULC0 261 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 SNX7Q9UNH6 387 aa10.66□□□□□ -0.7
HDAC6-228ENST00000486227 NPIPB15A6NHN6 443 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 GPR39O43194 453 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NTSR1P30989 418 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 IGFALSP35858 605 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TAS2R50P59544 299 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 FAM189BP81408 668 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 COMMD2Q86X83 199 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ANKRD13BQ86YJ7 626 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 OR4E2Q8NGC2 313 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 OR13J1Q8NGT2 312 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 PIH1D2Q8WWB5 315 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 RGMAQ96B86 450 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 CMTM7Q96FZ5 175 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 MUS81Q96NY9 551 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 YIPF4Q9BSR8 244 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 RPF2Q9H7B2 306 aaKnown RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF334Q9HCZ1 680 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TMEM30AQ9NV96 361 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 GDE1Q9NZC3 331 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF624Q9P2J8 865 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TRPS1Q9UHF7 1281 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 LOC285095A0A1B0GVY8 99 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TRIM64CA6NLI5 447 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 FADS2P1A8MWK0 482 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TMEM150CB9EJG8 249 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms