RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 FDFT1P37268 417 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 CEBPDP49716 269 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 GDI2P50395 445 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 WDR5P61964 334 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 PDE1BQ01064 536 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 BNC1Q01954 994 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 FUT7Q11130 342 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 MERTKQ12866 999 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 PIGHQ14442 188 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 MFSD13AQ14CX5 517 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ANGPT1Q15389 498 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 MAPK6Q16659 721 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 PARP6Q2NL67 630 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 DCAF6Q58WW2 860 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 NDUFAF5Q5TEU4 345 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 VWA5B1Q5TIE3 1220 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ATG9BQ674R7 924 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3GQ6DHY5 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 SUMO4Q6EEV6 95 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TXNRD3NBQ6F5E7 133 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 THOC7Q6I9Y2 204 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3CQ6IPX1 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TMEM65Q6PI78 240 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TPGS1Q6ZTW0 290 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 COPS6Q7L5N1 327 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 LAS2Q8IYD9 372 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ZDHHC23Q8IYP9 409 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 UBQLNLQ8IYU4 475 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3Q8IZP1 549 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 UBE2J2Q8N2K1 259 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TTLQ8NG68 377 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 OR8J2Q8NGG1 315 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 C9orf43Q8TAL5 461 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 CACNG8Q8WXS5 425 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 AKAP1Q92667 903 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS41-212ENST00000482217 WBP2Q969T9 261 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ULK4Q96C45 1275 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 HAVCR1Q96D42 359 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TRMT61AQ96FX7 289 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 ZNF514Q96K75 400 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 PRRC1Q96M27 445 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 CCNL2Q96S94 520 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 CHP1Q99653 195 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 NPAS1Q99742 590 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 NPAS2Q99743 824 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 OLFM1Q99784 485 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 PELOQ9BRX2 385 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 ALG12Q9BV10 488 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 HDHD5Q9BXW7 423 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 DCLK3Q9C098 648 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 DNTTIP1Q9H147 329 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 MTIF3Q9H2K0 278 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 AUNIPQ9H7T9 357 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS41-212ENST00000482217 ASB6Q9NWX5 421 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 GTSE1Q9NYZ3 720 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 GCNT4Q9P109 453 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D24Q9ULP9 559 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 EXO1Q9UQ84 846 aaKnown RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 IFT52Q9Y366 437 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ABCC4O15439 1325 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 SF3B1O75533 1304 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS41-212ENST00000482217 INSRP06213 1382 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 IQANK1A0A1B0GTG1 560 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 FAM237AA0A1B0GTK4 181 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TCRBV5S1A1TA0A578 114 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TRPC5OSA6NMA1 111 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 GOLGA8JA6NMD2 632 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ANKRD66B4E2M5 251 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 GPR171O14626 319 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 HAT1O14929 419 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RAD51BO15315 384 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ATP6V1G1O75348 118 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 NDUFS3O75489 264 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MBP02144 154 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ALDOAP04075 364 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 ICAM1P05362 532 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CHRM4P08173 479 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TMEM191BP0C7N4 346 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 PLA2G4BP0C869 781 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 GOLGA8HP0CJ92 632 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SLC2A3P11169 496 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CEACAM1P13688 526 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 IGFBP2P18065 325 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ZNF10P21506 573 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 KLRC2P26717 231 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MAT2AP31153 395 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 SLC8A1P32418 973 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 GRIA1P42261 906 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SLC1A6P48664 564 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ELLP55199 621 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 NANOS3P60323 173 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 EEF1A1P68104 462 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 ROR2Q01974 943 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 BDH1Q02338 343 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 IRF8Q02556 426 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 HSF2Q03933 536 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 EGR4Q05215 589 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 EEF1A2Q05639 463 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms