RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MAFKO60675 156 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 B4GALT2O60909 372 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 POLR2CP19387 275 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 IRF9Q00978 393 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GRIK2Q13002 908 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CCNIQ14094 377 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 LRRC17Q8N6Y2 441 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 OR5L2Q8NGL0 311 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 C15orf40Q8WUR7 153 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MR1Q95460 341 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 NXPE3Q969Y0 559 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 NODALQ96S42 347 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 STRA6Q9BX79 667 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 YTHDF1Q9BYJ9 559 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TRPV5Q9NQA5 729 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 POFUT2Q9Y2G5 429 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 PCDHGB2Q9Y5G2 931 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ENTPD2Q9Y5L3 495 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CFAP20Q9Y6A4 193 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 C2orf78A6NCI8 922 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RFPL2O75678 378 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CD63P08962 238 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TYRP1P17643 537 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ETV3P41162 512 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MTPNP58546 118 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RAB8AP61006 207 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RBBP4Q09028 425 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 COLEC12Q5KU26 742 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CDKL4Q5MAI5 379 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 FRMD7Q6ZUT3 714 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TICAM1Q8IUC6 712 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TXNDC5Q8NBS9 432 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 OR5P2Q8WZ92 322 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 SCAMP4Q969E2 229 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TPT1P8Q9HAU6 139 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GPN1Q9HCN4 374 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GPRC5BQ9NZH0 403 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 WDR45Q9Y484 360 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 OARD1Q9Y530 152 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 SAP18O00422 153 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 NADKO95544 446 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 HNRNPA2B1P22626 353 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RBMS1P29558 406 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF41P51814 821 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CASP6P55212 293 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CLLU1OSQ5K130 101 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 OR4F3Q6IEY1 312 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ADNP2Q6IQ32 1131 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 NCEH1Q6PIU2 408 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GALNT5Q7Z7M9 940 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 SYVN1Q86TM6 617 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF433Q8N7K0 673 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 KCT2Q8NC54 265 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 OR10G2Q8NGC3 310 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 FNDC8Q8TC99 324 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 LRRC20Q8TCA0 184 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MSANTD3Q96H12 275 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CNDP2Q96KP4 475 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MAPKAP1Q9BPZ7 522 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 C12orf65Q9H3J6 166 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 REEP4Q9H6H4 257 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 PCDHB16Q9NRJ7 776 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 PDE10AQ9Y233 779 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 DLGAP4Q9Y2H0 992 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 NOX1Q9Y5S8 564 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 DOT1LQ8TEK3 1739 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 BCAS2O75934 225 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 ASGR2P07307 311 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 BMP8BP34820 402 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GBX2P52951 348 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 SELENOVP59797 346 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RPS13P62277 151 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RPS15P62841 145 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 KCNC4Q03721 635 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 FADDQ13158 208 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 DSC3Q14574 896 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GRM7Q14831 915 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 IQCCQ4KMZ1 466 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 GPR107Q5VW38 600 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 CEACAM20Q6UY09 585 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 BMP8AQ7Z5Y6 402 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 KBTBD2Q8IY47 623 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MRPL43Q8N983 215 aaKnown RBP9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MRGPRX2Q96LB1 330 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RBP7Q96R05 134 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 EHD1Q9H4M9 534 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM184CQ9NVA4 438 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 SLCO3A1Q9UIG8 710 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 RARRES3Q9UL19 164 aa9.16□□□□□ -0.94
GARNL3-216ENST00000481242 KCTD3Q9Y597 815 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms