RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CD46P15529 392 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 NPPBP16860 134 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 ALOX12P18054 663 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 HPDP32754 393 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 AHRP35869 848 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 TDGF1P3P51864 188 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 SFT2D3Q587I9 215 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 RBM20Q5T481 1227 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 HECTD2Q5U5R9 776 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 C1QL3Q5VWW1 255 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 PAPD4Q6PIY7 484 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 LANCL3Q6ZV70 420 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 PRSS41Q7RTY9 318 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 NKAPQ8N5F7 415 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 KCT2Q8NC54 265 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 OR56A3Q8NH54 315 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 SLC5A11Q8WWX8 675 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 ANKRD7Q92527 254 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 TBC1D20Q96BZ9 403 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 CFAP36Q96G28 342 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 MAGED4Q96JG8 741 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 TAAR6Q96RI8 345 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 AIF1LQ9BQI0 150 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 ZFP69BQ9UJL9 534 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 VWA7Q9Y334 891 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 KCNE2Q9Y6J6 123 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 POLEQ07864 2286 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 UTP20O75691 2785 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 MYO9AB2RTY4 2548 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 A0A088AWK7 358 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 SYNDIG1LA6NDD5 238 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 GALR3O60755 368 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 F10P00742 488 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 FHP07954 510 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF10P21506 573 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 COL8A1P27658 744 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 EEF1DP29692 281 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 HNMTP50135 292 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 KCNK10P57789 538 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 OR4D2P58180 307 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 DR1Q01658 176 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 FRG1Q14331 258 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 DEFB134Q4QY38 66 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 H3F3CQ6NXT2 135 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 FRA10AC1Q70Z53 315 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 EID3Q8N140 333 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 BEST3Q8N1M1 668 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 PLPP5Q8NEB5 264 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 TTLQ8NG68 377 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 OR4K1Q8NGD4 311 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 NT5CQ8TCD5 201 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 MOCOSQ96EN8 888 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 PEX11GQ96HA9 241 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 PELI2Q9HAT8 420 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 CHMP2BQ9UQN3 213 aa13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-209ENST00000478349 IGHV3-20A0A0C4DH32 117 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 PRSS44E7EML9 344 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 GUCA1CO95843 209 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 TSPAN12O95859 305 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF37AP17032 561 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 GSTM2P28161 218 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 GABRB3P28472 473 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ELK3P41970 407 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 SLC12A2P55011 1212 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 RHAGQ02094 409 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 OC90Q02509 493 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ART3Q13508 389 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 OR1C1Q15619 314 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 KRTCAP3Q53RY4 240 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 TEDDM1Q5T9Z0 273 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ADAMTSL2Q86TH1 951 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 PDSS2Q86YH6 399 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF740Q8NDX6 193 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 PYCR2Q96C36 320 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 EGFL8Q99944 293 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 MACROD1Q9BQ69 325 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 CHST11Q9NPF2 352 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF860A6NHJ4 632 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CCDC188H7C350 402 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CCL21O00585 134 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 FCHO1O14526 889 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 RNH1P13489 461 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CA7P43166 264 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 SCTRP47872 440 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 SLC26A5P58743 744 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms