RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 STX3Q13277 289 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 HKDC1Q2TB90 917 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEC13-215ENST00000477547 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 DCAF12Q5T6F0 453 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 LAS2Q8IYD9 372 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 LSMEM2Q8N112 164 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 CAMKVQ8NCB2 501 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 OR7G3Q8NG95 312 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 FAM76AQ8TAV0 307 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 AGR3Q8TD06 166 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 RNF31Q96EP0 1072 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 TAAR9Q96RI9 348 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 KCNA7Q96RP8 456 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 NRSN2Q9GZP1 204 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 ELOVL6Q9H5J4 265 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 STARD5Q9NSY2 213 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 SERTAD3Q9UJW9 196 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 B3GALT1Q9Y5Z6 326 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 H3BMH7 237 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 ITM2AO43736 263 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SCRG1O75711 98 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 FOXA1P55317 472 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 GALNT1Q10472 559 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 IFT88Q13099 833 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 GRM7Q14831 915 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 PRTGQ2VWP7 1150 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 TCHHL1Q5QJ38 904 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 SH2D4BQ5SQS7 431 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 TMEM164Q5U3C3 297 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 FRG2Q64ET8 278 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 ATG16L1Q676U5 607 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 PWWP2BQ6NUJ5 590 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 TLDC1Q6P9B6 456 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 VN1R5Q7Z5H4 357 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 BPHLQ86WA6 291 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 PIAS4Q8N2W9 510 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 TRPV3Q8NET8 790 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 HUS1BQ8NHY5 278 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 ZCCHC10Q8TBK6 192 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SLC13A3Q8WWT9 602 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 USP7Q93009 1102 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SEC16BQ96JE7 1060 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 TEFMQ96QE5 360 aaKnown RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 FRG2BQ96QU4 278 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 MACROD1Q9BQ69 325 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 ULBP3Q9BZM4 244 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SLC7A5P2Q9GIP4 190 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SPRTNQ9H040 489 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 RHBGQ9H310 441 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 TNFRSF12AQ9NP84 129 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 DMRT3Q9NQL9 472 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 ZNF490Q9ULM2 529 aaPredicted RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 SNX6Q9UNH7 406 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 SRPK3Q9UPE1 567 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 RUVBL1Q9Y265 456 aaKnown RBP14.61□□□□□ -0.07
SEC13-215ENST00000477547 FIS1Q9Y3D6 152 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 PCDHGA3Q9Y5H0 932 aa14.61□□□□□ -0.07
SEC13-215ENST00000477547 C9orf172C9J069 976 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 TXNDC9O14530 226 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 CLEC3AO75596 197 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 KRT6AP02538 564 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 KRT6BP04259 564 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 RBMS1P29558 406 aaKnown RBP14.6□□□□□ -0.07
SEC13-215ENST00000477547 SLC1A6P48664 564 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 KRT6CP48668 564 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 HTR6P50406 440 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 PWP1Q13610 501 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 SGO1Q5FBB7 561 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 TOR1AIP1Q5JTV8 583 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 C10orf62Q5T681 223 aaPredicted RBP14.6□□□□□ -0.07
SEC13-215ENST00000477547 PRAMEF17Q5VTA0 474 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 CLEC6AQ6EIG7 209 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 WDR20Q8TBZ3 569 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 METTL6Q8TCB7 284 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 NT5CQ8TCD5 201 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 LRRC8CQ8TDW0 803 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 ZNF473Q8WTR7 871 aaKnown RBP14.6□□□□□ -0.07
SEC13-215ENST00000477547 C10orf90Q96M02 699 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 HBEGFQ99075 208 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 MTERF1Q99551 399 aaKnown RBP14.6□□□□□ -0.07
SEC13-215ENST00000477547 ZPBPQ9BS86 351 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 NDC1Q9BTX1 674 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 ASPSCR1Q9BZE9 553 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 MANSC1Q9H8J5 431 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 ACTR5Q9H9F9 607 aaPredicted RBP14.6□□□□□ -0.07
SEC13-215ENST00000477547 FOXJ2Q9P0K8 574 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 ADGRE2Q9UHX3 823 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 TSC22D4Q9Y3Q8 395 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 TIMM22Q9Y584 194 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 PCDHB3Q9Y5E6 796 aa14.6□□□□□ -0.07
SEC13-215ENST00000477547 KALRNO60229 2985 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 FITM1A5D6W6 292 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 TRABD2BA6NFA1 517 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 TMEM233B4DJY2 109 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 MANBAO00462 879 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 AZIN1O14977 448 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 ZNF749O43361 778 aa14.59□□□□□ -0.07
SEC13-215ENST00000477547 BRINP1O60477 761 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms