RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GPATCH11Q8N954 259 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 OR11G2Q8NGC1 345 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 OR1N1Q8NGS0 311 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 OR13J1Q8NGT2 312 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 STT3BQ8TCJ2 826 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 SMPDL3AQ92484 453 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF285Q96NJ3 590 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 PTCHD1Q96NR3 888 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 BAG1Q99933 345 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC68Q9H2F9 335 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 MRPS30Q9NP92 439 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 EIF2B3Q9NR50 452 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 HOMER3Q9NSC5 361 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ERVK13-1Q9NX77 482 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 COPG2Q9UBF2 871 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 RNF112Q9ULX5 631 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ZKSCAN5Q9Y2L8 839 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CACNA1DQ01668 2161 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 SNRNP200O75643 2136 aaKnown RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 PABPN1LA6NDY0 278 aaKnown RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 OR51F1A6NGY5 319 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 OR1I1O60431 355 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 C1orf105O95561 183 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 SERPINA7P05543 415 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 STSP08842 583 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 PRSS56P0CW18 603 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 TNFRSF8P28908 595 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 PEBP1P30086 187 aaKnown RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 OR1D4P47884 311 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 SKP1P63208 163 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 ABATP80404 500 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 CDK16Q00536 496 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 RELAQ04206 551 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 KLC1Q07866 573 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 KLF1Q13351 362 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 ART3Q13508 389 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 MSMPQ1L6U9 139 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 ABHD17BQ5VST6 288 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 HIST2H2BCQ6DN03 193 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 TMEM207Q6UWW9 146 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 LINC00696Q6ZRV3 163 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 MTDHQ86UE4 582 aaKnown RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 TAX1BP1Q86VP1 789 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 HORMAD2Q8N7B1 307 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 LRRC57Q8N9N7 239 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 OR2L3Q8NG85 312 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 CHAC2Q8WUX2 184 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 ALG3Q92685 438 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 HAS2Q92819 552 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 HRASLS5Q96KN8 279 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF160Q9HCG1 818 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 PRDM7Q9NQW5 492 aa6.9□□□□□ -1.3
BRCA1-214ENST00000477152 KLF2Q9Y5W3 355 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-214ENST00000477152 DOCK10Q96BY6 2186 aa6.9□□□□□ -1.31
BRCA1-214ENST00000477152 A0A0J9YVX5 310 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PRSS44E7EML9 344 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 LIASO43766 372 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 RASAL1O95294 804 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TPBGLP0DKB5 382 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 EZRP15311 586 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 CHRM3P20309 590 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PTGER4P35408 488 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SMSP52788 366 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 EIF3BP55884 814 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SP5Q6BEB4 398 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 NIPAL1Q6NVV3 410 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 NAPRTQ6XQN6 538 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 RNF111Q6ZNA4 994 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 RNF44Q7L0R7 432 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 C2orf73Q8N5S3 287 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 LINC01555Q8NAE3 123 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 OR9A1PQ8NGU1 263 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 DIO2Q92813 273 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 RELTQ969Z4 430 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TUBB6Q9BUF5 446 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SLC22A11Q9NSA0 550 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PIH1D1Q9NWS0 290 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PTGFRNQ9P2B2 879 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TRPC4Q9UBN4 977 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 MAU2Q9Y6X3 613 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 IGLV3-12A0A075B6K2 115 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 MAGEB16A2A368 324 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 HCRTR1O43613 425 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 CNOT3O75175 753 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 OGNP20774 298 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 ADARP55265 1226 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 BASP1P80723 227 aaKnown RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TSTA3Q13630 321 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 VWA2Q5GFL6 755 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 C1QL3Q5VWW1 255 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 ATG9BQ674R7 924 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 AADACL2Q6P093 401 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms