RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 IRAK1BP1Q5VVH5 260 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 CCDC91Q7Z6B0 441 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 ISCA2Q86U28 154 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 PDSS2Q86YH6 399 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 IFT20Q8IY31 132 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 ANKRD53Q8N9V6 530 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 OR51Q1Q8NH59 317 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 UHMK1Q8TAS1 419 aaKnown RBP22.75■■□□□ 1.23
CPNE1-223ENST00000475146 NT5CQ8TCD5 201 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 NXNL1Q96CM4 212 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 RHOXF2Q9BQY4 288 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 CAPS2Q9BXY5 557 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 FUT8Q9BYC5 575 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 GPRC5BQ9NZH0 403 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 NUDT4Q9NZJ9 180 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 MKL2Q9ULH7 1088 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 IKBKGQ9Y6K9 419 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 HMX2A2RU54 273 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 CCNT2O60583 730 aaKnown RBP22.74■■□□□ 1.23
CPNE1-223ENST00000475146 DPM1O60762 260 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 KERAO60938 352 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 JRKO75564 520 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 BMP10O95393 424 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 C2P06681 752 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 GGT5P36269 586 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 XCR1P46094 333 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 EEF1A2Q05639 463 aaKnown RBP22.74■■□□□ 1.23
CPNE1-223ENST00000475146 SLBPQ14493 270 aaKnown RBP eCLIP22.74■■□□□ 1.23
CPNE1-223ENST00000475146 MINDY4Q4G0A6 757 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 NADK2Q4G0N4 442 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 SLCO4C1Q6ZQN7 724 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 PARP9Q8IXQ6 854 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 TRPV3Q8NET8 790 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 SLC44A1Q8WWI5 657 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 ZNF160Q9HCG1 818 aa22.74■■□□□ 1.23
CPNE1-223ENST00000475146 PTBP2Q9UKA9 531 aaKnown RBP22.74■■□□□ 1.23
CPNE1-223ENST00000475146 A0A096LPK6 155 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 UBXN8O00124 270 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 CLGNO14967 610 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 HPP00738 406 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ZNF888P0CJ79 500 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ALOX12P18054 663 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 TYK2P29597 1187 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 HNF4AP41235 474 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 KCNC1P48547 511 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 SKP1P63208 163 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 PDK4Q16654 411 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 FAM83EQ2M2I3 478 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 DEFB134Q4QY38 66 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ATG9BQ674R7 924 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ABHD13Q7L211 337 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 TAOK1Q7L7X3 1001 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 HPS6Q86YV9 775 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.73■■□□□ 1.23
CPNE1-223ENST00000475146 CENPLQ8N0S6 344 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-223ENST00000475146 KRT78Q8N1N4 520 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ATOH8Q96SQ7 321 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 PAFAH2Q99487 392 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 VPS11Q9H270 941 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 ZNF552Q9H707 407 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-223ENST00000475146 C5AR2Q9P296 337 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 SCN3AQ9NY46 2000 aa22.73■■□□□ 1.23
CPNE1-223ENST00000475146 NSG1A0A0A6YYJ2 146 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 POC1B-GALNT4F8VUJ3 575 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 ALDOAP04075 364 aaKnown RBP22.72■■□□□ 1.23
CPNE1-223ENST00000475146 GLRBP48167 497 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 SOX8P57073 446 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 LRRC70Q7Z2Q7 622 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 SHISA5Q8N114 240 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 AFAP1L2Q8N4X5 818 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 CCT6BQ92526 530 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 MFRPQ9BY79 579 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 RBCK1Q9BYM8 510 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 VN1R1Q9GZP7 353 aa22.72■■□□□ 1.23
CPNE1-223ENST00000475146 A0A087WUV0 522 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-223ENST00000475146 URADA6NGE7 173 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 PCDH17O14917 1159 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 GALR3O60755 368 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-223ENST00000475146 B3GALT4O96024 378 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 C8orf89P0DMQ9 161 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 COX6A1P12074 109 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 MSH2P43246 934 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 SERPINB9P50453 376 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 XKR6Q5GH73 641 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 TOR1AIP1Q5JTV8 583 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 KLC3Q6P597 504 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 TMIGD1Q6UXZ0 262 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 TTLQ8NG68 377 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 OR5T3Q8NGG3 340 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 UTP15Q8TED0 518 aaKnown RBP22.71■■□□□ 1.23
CPNE1-223ENST00000475146 METTL21AQ8WXB1 218 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 PEX11GQ96HA9 241 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 THOC3Q96J01 351 aaKnown RBP22.71■■□□□ 1.23
CPNE1-223ENST00000475146 CD244Q9BZW8 370 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 SLC6A16Q9GZN6 736 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 ASB1Q9Y576 335 aa22.71■■□□□ 1.23
CPNE1-223ENST00000475146 SYCE1LA8MT33 242 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 SERPINA6P08185 405 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 AGTR2P50052 363 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 CSRP3P50461 194 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms