RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
CKS1B-206ENST00000474215 HCN3Q9P1Z3 774 aa10.58□□□□□ -0.72
CKS1B-206ENST00000474215 ANKRD12Q6UB98 2062 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 NCF1BA6NI72 391 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 NCF1CA8MVU1 366 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 TAPBPO15533 448 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 GALR3O60755 368 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 VPS4BO75351 444 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 RDH16O75452 317 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 SERPINA7P05543 415 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 PRR35P0CG20 571 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 C8orf89P0DMQ9 161 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 C1GALT1C1LP0DN25 315 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 ICAM2P13598 275 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 NCF1P14598 390 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 ALOX12P18054 663 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 IL10P22301 178 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 CRABP2P29373 138 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 EFNA3P52797 238 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 SKP1P63208 163 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 REEP5Q00765 189 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 EEF1A2Q05639 463 aaKnown RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 RGS1Q08116 209 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 RBBP5Q15291 538 aaKnown RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 OR4D1Q15615 310 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 MINDY4Q4G0A6 757 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 DEFB134Q4QY38 66 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 MFSD4BQ5TF39 518 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 SULT1C3Q6IMI6 304 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 NIPAL1Q6NVV3 410 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 ISLR2Q6UXK2 745 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 Q6ZS92 163 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 CEP128Q6ZU80 1094 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 RAPH1Q70E73 1250 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 TMPRSS11BQ86T26 416 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 IQCKQ8N0W5 287 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 SHISA5Q8N114 240 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 GALNT11Q8NCW6 608 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 KIAA1191Q96A73 305 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 LMF1Q96S06 567 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 ILKAPQ9H0C8 392 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 RIC8BQ9NVN3 520 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 DMGDHQ9UI17 866 aaKnown RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 VPS4AQ9UN37 437 aa10.57□□□□□ -0.72
CKS1B-206ENST00000474215 SETXQ7Z333 2677 aaKnown RBP10.57□□□□□ -0.72
CKS1B-206ENST00000474215 MDC1Q14676 2089 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CTAGE15A4D2H0 777 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 OR2W5A6NFC9 320 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 URADA6NGE7 173 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 ZNF860A6NHJ4 632 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CHST10O43529 356 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CTAGE8P0CG41 777 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 ZNF888P0CJ79 500 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 SLC35E2BP0CK96 405 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 KCNC1P48547 511 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 AP2B1P63010 937 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CDC16Q13042 620 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 MFAP5Q13361 173 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 SLMAPQ14BN4 828 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 EFTUD2Q15029 972 aaKnown RBP eCLIP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 PCOLCEQ15113 449 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 GLE1Q53GS7 698 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 PRR30Q53SZ7 412 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CRB2Q5IJ48 1285 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 TMIGD1Q6UXZ0 262 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 LINC00696Q6ZRV3 163 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 ABHD13Q7L211 337 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CPEB2Q7Z5Q1 589 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CMC1Q7Z7K0 106 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 TBC1D1Q86TI0 1168 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 ISCA2Q86U28 154 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CTAGE6Q86UF2 777 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 RELL1Q8IUW5 271 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CTAGE4Q8IX94 777 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CISD2Q8N5K1 135 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 NOA1Q8NC60 698 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 OR5T3Q8NGG3 340 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 DNAJB14Q8TBM8 379 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 STAG3L4Q8TBR4 150 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 UTP15Q8TED0 518 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CREB3L4Q8TEY5 395 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 PPP4R1Q8TF05 950 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 IFT81Q8WYA0 676 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 PSMF1Q92530 271 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 IMMP1LQ96LU5 166 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 OR1F2PQ96R84 312 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 WDR77Q9BQA1 342 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 TUBB6Q9BUF5 446 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 SLC6A16Q9GZN6 736 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 TSPYL1Q9H0U9 437 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 EPS8L2Q9H6S3 715 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CLK4Q9HAZ1 481 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 NMRAL1Q9HBL8 299 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 DNAJC11Q9NVH1 559 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 WWOXQ9NZC7 414 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 CD274Q9NZQ7 290 aa10.56□□□□□ -0.72
CKS1B-206ENST00000474215 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
CKS1B-206ENST00000474215 PTBP2Q9UKA9 531 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms